Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00828 ATGAGACATCTTTTGCTGTTGATGATAATGTCAGTTCATTTATTGCCAGGTGAACCTTGTGAGTTTTACCATTGTGTGTTGGAGAGTAAGTCATTTCTTGAAAAGATGACTGTCCTTGAGCACACAGTTCCATTTTTCCTGCCGATAAGGGAAACAGAAAGTGATCTTCTTTCATCCAATGCAATGAAATTCATAGATCATGTTGGAGATCTATTGCAGGCATATGTGGATAGACGGGAACAGGTCAGACTTATAAAGGAGCTTTATGGAAATCAAATTGGAGAGCTGTATCATAGCCTTCCTTATCACATGATTGAATTTGTACTGGATGACTTTGACTGCAAGGTGACAGTCAGCCTTCGATATGCAGATCTCATTTCTGTGCTTCCAACTCGAATCACAGTGCTAGCCTGGCCAATGTTCAAGAAAAATACTACTGGGACTTTGAACAGGAAGGAAGACGGAATCTCAGGAAGTCATCCCGCTCCAGTTCGCCTATCCTATGCAGAAGATGCCTTGCGGACCATGAGTCTACCAGAAGCATATGCAGAGATTGTATTAAATCTACCCCAAGCGCTTCAGCAGATGTATCATCAAAGAGCCCTCACCTAG 612 0.4232 MRHLLLLMIMSVHLLPGEPCEFYHCVLESKSFLEKMTVLEHTVPFFLPIRETESDLLSSNAMKFIDHVGDLLQAYVDRREQVRLIKELYGNQIGELYHSLPYHMIEFVLDDFDCKVTVSLRYADLISVLPTRITVLAWPMFKKNTTGTLNRKEDGISGSHPAPVRLSYAEDALRTMSLPEAYAEIVLNLPQALQQMYHQRALT. 204
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00828 203 Pfam Cenp-O kinetochore centromere component 17 195 IPR018464 GO:0000776|GO:0034508
Seca4g00828 203 PANTHER INNER KINETOCHORE SUBUNIT MAL2 16 195 IPR018464 GO:0000776|GO:0034508
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Seca4g00828 Seca-Chr4 13780023 13783897 Transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00828 K11507 - gmx:100786656 344.354