Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00826 ATGCAACCCCAGCAGAGCTCAAGAATTGATCTGAGTGAATTAAAGGCACATATTATAAAGAAGCTTGGAGTGGATAAGTCAAAGCGGTACTTTTATTACTTGAACAGGTTTCTGAGCCAGAAGCTGACCAAGATTGAATTTGATAAGTTGTGTTCTCGAGTACTTGGGAGGGAGAATCTTCCGTTGCACAACCATTTTATAAAGTCAATTTTGAAGAATGCCTTCCAAGCCAAGACCCCACCACCAATCAAGCTATCTGGTCCACCAAAGTCTGGACCTCATGCTACAGAGGTATCTCCTGGAAGGGAAGATGGGCATGAACAGAGTGTTGCCAGCTTCCAAAATCAAAATCAAAATCCAACCATTTGGTCAAATGGGGTTTTGCCTGTATCCCCACGTAAGGTTAGGTCTGGAATACGTGACCGGAAGTTGAGGGATAGACCAAGCCCTCTCGGACCAAATGGGAAGGTTGATTCTCTTACTCACCAATCCATGGGTACAGAAGACAGTGGTAGTAAGGCTGATATGGAAAATGGAGTTCTTACTCCATGTGATTATCAGAGACCCACACAGCATCTTCAAGCTGTTGCTGAGCTACCTGAGAATGAAAGGGGGGATGCTGTTCAGCGACCTGCAGAAAAACCAAGAATACATGACAAAGGGCCGCCCGAAATGTCAATTGTTGAAGACGGGGAAGAGGTGGATCAGTTGAACCACCTGAGTTTCTCTAAAAGTCCCTTGATAGCACCACTTGGGATTCCTTACTGCTCAGCAAGTGTAGGTGGGGCCCGCAAAGCATTGCCAGTGACCAGCACTGGTGATTTTGATAGTTGTTGTGACAGTGGTTGGTTGTCTGATACAGATACACTGCGAAGGCGCATGGAGCAGATTGCCACAGTACAGGGTCTTGGAGGTGTTTCTATGGAATGTGCCAATATGTTAAATAATGTGTTGGATGTGTACTTGAAACGGTTGATCAGGTCTTGTGTTGAATTAGTCGGAGCTAGGTCTACAAATGAGCTGAGGAAGCCCCCTGCCCCCAAACAGCAGATTCAGGGTAAGGTCATCAATGGCATGTGGCCAAGTAATCATTTACATGCGCAGAGTGCTGGTGGGCTGGGAGAACCTGTTCTTGAACACAGACCACCGAGCTCAGTTTCTTTGCATGATTTTAAAGTTGCCATGGAGCTAAATCCACAGAAACTTGGAGAAGATTGGCCTCTGCTGTTGGAGAAAATATCCATGCAATCGTTTGAGGAATAA 1263 0.4576 MQPQQSSRIDLSELKAHIIKKLGVDKSKRYFYYLNRFLSQKLTKIEFDKLCSRVLGRENLPLHNHFIKSILKNAFQAKTPPPIKLSGPPKSGPHATEVSPGREDGHEQSVASFQNQNQNPTIWSNGVLPVSPRKVRSGIRDRKLRDRPSPLGPNGKVDSLTHQSMGTEDSGSKADMENGVLTPCDYQRPTQHLQAVAELPENERGDAVQRPAEKPRIHDKGPPEMSIVEDGEEVDQLNHLSFSKSPLIAPLGIPYCSASVGGARKALPVTSTGDFDSCCDSGWLSDTDTLRRRMEQIATVQGLGGVSMECANMLNNVLDVYLKRLIRSCVELVGARSTNELRKPPAPKQQIQGKVINGMWPSNHLHAQSAGGLGEPVLEHRPPSSVSLHDFKVAMELNPQKLGEDWPLLLEKISMQSFEE. 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00826 420 PANTHER TRANSCRIPTIONAL ADAPTER 1 1 419 IPR024738 GO:0070461
Seca4g00826 420 MobiDBLite consensus disorder prediction 108 126 - -
Seca4g00826 420 MobiDBLite consensus disorder prediction 197 224 - -
Seca4g00826 420 MobiDBLite consensus disorder prediction 78 175 - -
Seca4g00826 420 MobiDBLite consensus disorder prediction 156 171 - -
Seca4g00826 420 MobiDBLite consensus disorder prediction 135 149 - -
Seca4g00826 420 MobiDBLite consensus disorder prediction 203 224 - -
Seca4g00826 420 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 4 333 IPR024738 GO:0070461
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00826 Seca-Chr4 13722810 13724072 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00826 - - gmx:100819343 717.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00826 4 13722810 13724072 Seca4g00826 4 13722810 13724072 ECH
Seca4g00826 4 13722810 13724072 Seca4g00826 4 13722810 13724072 PCT