Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00821 ATGGCGGTTGTGGAAGGTGAGAAAGAAGGAATCAAGGAGCAAGAAGCACTGATTCCAGGGTTACCAGACGAAATTGCAGAGCTGTGTCTTCTTCAAATTCCGTACCCATACCAGTCTCTGGTACGCTCTGTTTCTTCATCATGGAACAGAGCAATAACAAACCCTTCCTTCAAGAAAACCCTCTCTCTCCCATACCTCTTTGTATTAGCCTTCCACACACCAACCGCCAGGATTCAATGGCAAGCGCTTGACCCTTCATCAGGCCGTTGGTTCGTCCTCCCTCCCATGCCACTCCCAAACGACGCCGTTTCTCCAACGGCTTTCACATGCACCTCGTTACCGCGTCAGGGGAAGCTCTTCGTCATGGAGAACACCGACTCTCCAATGAGGACCACGCTCGTGTACTGCACCGCCACTAACCAGTGGTCGCCGGCGTCGCCCATGCCGCGCTCGTGCTTTGCGGCGGAGGGCGTGAACGGGAGAATCGTGACCGTTGGTGGAAGCGGGATAGAAATCTACGACTCGGAGAGTGACACGTGGACGAAAGGTGCGGGGTTAAGGGGGGAGTTAGAGAGATATGAAACGGCGGTGGTAGGGGAGAGGATGTTCGTTACGGAGGGTTGGTGGTGGCCGTTCACGTTTCGGCCGAGGGGTTGGGCTTACGAATTGGAGAGGGACACGTGGCGAGAGATGAGGGAAGGAATGAGAGATGGATGGACAGGATTGAGCGTGGCGGTTGAGGGAAAGGTGTTTGTGATAGCGGAGTATGGTGACTGGCTGGTGAAGGTGTACGATGAGGATACTGACACGTGGCAGTGTGTGGGAGGGGATAGGTTCCCTAGGGAAGCAATGCAACGGCCTTTTGTTGCTAAAGGGTTGGATGGGAAAATCTATGTGGTTTCCTTTGGGTTGAATGTGGCCATTGGAAGTGTTGTTCATGTTGATGTTCCCCAACACCATCACAATGTTATTAAAGTGACGTGGCAGGTTGTGAAGGCAACACAGGCTTTTCGTGAATTCTCAGCTTGTAGTTGCCAGGTGCTGTATGGTTGA 1053 0.5299 MAVVEGEKEGIKEQEALIPGLPDEIAELCLLQIPYPYQSLVRSVSSSWNRAITNPSFKKTLSLPYLFVLAFHTPTARIQWQALDPSSGRWFVLPPMPLPNDAVSPTAFTCTSLPRQGKLFVMENTDSPMRTTLVYCTATNQWSPASPMPRSCFAAEGVNGRIVTVGGSGIEIYDSESDTWTKGAGLRGELERYETAVVGERMFVTEGWWWPFTFRPRGWAYELERDTWREMREGMRDGWTGLSVAVEGKVFVIAEYGDWLVKVYDEDTDTWQCVGGDRFPREAMQRPFVAKGLDGKIYVVSFGLNVAIGSVVHVDVPQHHHNVIKVTWQVVKATQAFREFSACSCQVLYG. 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00821 350 PANTHER OS02G0202900 PROTEIN 11 348 IPR045887 -
Seca4g00821 350 Gene3D - 57 344 IPR015915 GO:0005515
Seca4g00821 350 SUPERFAMILY Kelch motif 65 301 IPR015915 GO:0005515
Seca4g00821 350 CDD F-box_AtAFR-like 17 57 - -
Seca4g00821 350 SMART fbox_2 21 61 IPR001810 GO:0005515
Seca4g00821 350 Pfam Kelch motif 149 186 IPR006652 GO:0005515
Seca4g00821 350 SUPERFAMILY F-box domain 16 70 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00821 Seca-Chr4 13641705 13642757 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00821 - - gmx:102668990 443.351