Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00811 ATGGCTCCAAGATTGGATTTTTCCAATTGGTGGACCAAGGATACACAGAAAGGAACACCAGTGGTAGTGAAAATGGAGAACCCCACTTTCTCTGTTGTGGAGATTAATGGTGCAGATGCTGCATTCAGGCCAGTAGAGAAAAGCCGTGGCAAGAATGCTAAGCAAGTCACATGGGTGTTGCTTCTTAAGGCTCATCGTGCTGTTGGCTGTGTTACTTGGCTTGCCAATGTTCTGTGGGCGTTGCTTGGAGCTATTAAGAAGAGGTTGATTCATAGAAATTTGGAGAGTGAGAGTGACAAGTTGGAGAAAGGGAAGTTACTGTTTAGAGTTATTGGTGTGTTCTTAGTTACTTCCTTGGCAGCTCTGGCTTTTGAGGTTGTTGCTTACCTTCAAGGTTGGCATTTTAGGAGTCCCAATTTGTTGCACATTCCTCGTACTTCTGATTTGGAAGGATTGCTACATATGGCTTATGTTGCTTGGTTAACATTTCGTGCTGAGTACATTGCTCCACCTATACAGGCCCTTTCAAAGTTTTGTGTTGTTTTGTTTCTCATCCAATCTGTGGATCGTTTGCTTCTTTGCTTGGGGTGCTTTTGGATAAAATTTAGGAAGGTTAAGCCAAGGATTGTTGGGGATCCCTTCATGATTGATGATGTTGAAGGATCTGCATGCAATTATCCCATGGTTCTGATTCAAATTCCAATGTGCAATGAGAGAGAGGTGTATGAGCAGTCTATTTCTGCAGTATGCCAAATTGATTGGCCAAGAGATCGTTTACTGATTCAAGTACTTGATGATTCTAATGATGAGAGCATACAGTGGTTAATTAAGACAGAGGTCTCTAAGTGGAGCCAAAAGGGAATCAACATAATCTATAGGCATCGCTTAGTCAGGACTGGATATAAAGCTGGAAATCTTAAATCTGCAATGAGTTGTGACTATGTGAAAGACTATGAGTTTGTTGCAATTTTTGATGCAGATTTTCAACCAAATCCTGATTTTCTTAAGCAAACTGTGCCACATTTCAAGGACAATCCTGAACTAGGTTTGGTCCAAGCTAGATGGTCTTTTGTGAACAAGGATGAGAATTTGTTGACTCGTCTACAAAACATTAATTTATGCTTCCATTTTGAAGTAGAACAGCAGGTCAATGGGGTGTTTCTCAATTTCTTTGGTTTCAATGGAACTGCTGGTGTTTGGAGGATCAAAGCATTAGAAGAGTCTGGGGGCTGGCTGGAGAGAACAACTGTAGAAGATATGGACATTGCTGTTCGAGCTCATCTCAATGGTTGGAAATTTATCTTCCTAAATGATGTAAAGGTACTTTGTGAAGTTCCTGAGTCATATGAAGCTTATAGAAAGCAGCAACACCGCTGGCATTCAGGTCCTATGCAACTATTTAGGTTATGTCTTCCAGCAATTTTGAAATCTAAGGTGTCAGCATGGAAGAAAGCAAACTTAATACTGCTATTTTTTCTGTTAAGAAAACTAATCCTTCCCTTTTATTCCTTCACCTTATTTTGCATAATTCTTCCTTTAACCATGTTTGTCCCAGAGGCAGAGCTTCCTCTATGGGTGATCTGTTATGTGCCTGTATTTATGTCATTCCTTAACATTCTTCCTGCCCCAAAATCTTTTCCTTTTATTGTTCCCTACCTCCTTTTTGAAAATACTATGTCTGTCACAAAATTCAATGCAATGGTATCTGGACTCTTCCAATTGGGCAGCTCTTATGAATGGATTGTCACAAAAAAGGCTGGCAGGTCATCAGAGTCTGATTTACTGGCTGTTGCTGAAAAGGAAGCCAAGTCAATAGAACAAAAGATCCAGAGAGGAGCTTCTGACAGTGAACTTGTTGAGTCACACCATTTAAAGGAACACAAAGAAGCAGCTCCAACACCTGTTAAGAAAGCTAATAAGATATATAAGAAAGAGCTGACTTTGGCATTTCTCCTTCTCACAGCTTCAGTTAGGAGTCTGTTATCTGCACAAGGTGTTCACTTCTACTTTCTGCTTTTCCAAGGGGTGACTTTTCTCCTTGTGGGACTTGATTTGATTGGAGAGCAGATGAGCTAG 2076 0.4051 MAPRLDFSNWWTKDTQKGTPVVVKMENPTFSVVEINGADAAFRPVEKSRGKNAKQVTWVLLLKAHRAVGCVTWLANVLWALLGAIKKRLIHRNLESESDKLEKGKLLFRVIGVFLVTSLAALAFEVVAYLQGWHFRSPNLLHIPRTSDLEGLLHMAYVAWLTFRAEYIAPPIQALSKFCVVLFLIQSVDRLLLCLGCFWIKFRKVKPRIVGDPFMIDDVEGSACNYPMVLIQIPMCNEREVYEQSISAVCQIDWPRDRLLIQVLDDSNDESIQWLIKTEVSKWSQKGINIIYRHRLVRTGYKAGNLKSAMSCDYVKDYEFVAIFDADFQPNPDFLKQTVPHFKDNPELGLVQARWSFVNKDENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKVLCEVPESYEAYRKQQHRWHSGPMQLFRLCLPAILKSKVSAWKKANLILLFFLLRKLILPFYSFTLFCIILPLTMFVPEAELPLWVICYVPVFMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSSYEWIVTKKAGRSSESDLLAVAEKEAKSIEQKIQRGASDSELVESHHLKEHKEAAPTPVKKANKIYKKELTLAFLLLTASVRSLLSAQGVHFYFLLFQGVTFLLVGLDLIGEQMS. 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00811 691 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 220 446 IPR029044 -
Seca4g00811 691 Pfam Glycosyl transferase family group 2 321 527 IPR001173 -
Seca4g00811 691 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 155 688 - -
Seca4g00811 691 SUPERFAMILY Nucleotide-diphospho-sugar transferases 226 507 IPR029044 -
Seca4g00811 691 Coils Coil 595 615 - -
Seca4g00811 691 FunFam probable xyloglucan glycosyltransferase 5 220 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00811 Seca-Chr4 13464385 13468441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g00811 1 691 Miscellaneous Gene Families AT4G31590 81.268 0.0 1139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00811 - - gmx:100776577 1286.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00811 4 13464385 13468441 Seca4g00811 4 13464385 13468441 ECH