Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00805 ATGGCAGGGATGAATTTTGAAGGCAAACATATTGATGGCCATGATGTTCTGAAAATATTTGCAGCTGAAGGTGTTGAGTTCCTTTTATCTTGTGAAGGGAAGGTACCATTGTCAGAATGCAGTGGAAAAATCATCTGCCTATTTTTCTCTGCCAACTGGTGCAGGCCTTGCAGAGCTTTCATTCCCCGTCTGGTTGAACTTTATGAAACACTAAGAAAGCAGGGAATAAATCTTGAGATCATCTTCATCTCCTTTGATCGTGATGAGGATGGATTCAAAGAACACATCAAGAATATGCCATGGCTAGCTGTCCCATTTGATGTAAATTTGCATAGAAGACTGATTGACAGATACCGAATTGATCGAATCCCATCATTCATTCCACTATGTTCAGAAGACTTAACTGCTGAAGAAAACTTGATTGAGTGCATTGAGGATTATGGTGCTGATGCATTTCCTTTCACAAAGAAAAGACATGAGGAATTGAAAACCATAGATAAAAGGAAACGTGAAGAAGCAACTTTAGAAGAATTATTGGCGCATGAAGGACGCAACTTTCTCATCTCTGGAGATGATAGAAAGGTACCTATATCTGAACTAGCTGGTAAAACTGTAGGCCTATATTTTTGTGCCTACTGGTCTCCTCCTTGCCGTGCTTTCACCATCCAACTTACTGATGTATACAACAATCTCAAGGCTGAAAAAGGACACTGCTTTGAGATTGTTTTAATCTCAACTGATAGGGACCTTAAGGAGTTCAATGTCAACATAAGTAGTATGCCATGGCTTGCTATCCCATATGAGGACAGAACAAGGCATGACCTTTGTAGAATCTTTGATGTAAAGGGAATTCCAGCTTTGGTTTTCATTGGACCTGATGGCAAAGTCATTAGTATGAATGGGAAGTTTATGGTCTCCTCTTATGGTGCAGATGCTTTCCCATTTACTGAATCAAGGGTAAGAGACCTTGAAGCTGCTCTTAGAAAGGAAGGAGAGGCTTTGCCTCAACAGGTTGAGGATGTCAAGCATGAACATGTACTGAAATTGGATATGGCCAAAGCATATGTATGTGATTCATGTAAAAAGCAAGGGAAGTTCTGGACATTCTCTTGTGATGTCTGTGACTATGATCTTCATCCAAGTTGTCTAGAAAAGGATTGCAAGAGTTTTAGAACAAAGAGAGGAATGTGGTTGCCAAAGAATCAGTCAGAGAAGAAGGATGGTGTGAATGGATTAATAGCAGTGGCAATAGACAAAGAAAAAGGAAGCCAAAATGCACTCAAATGGGCTGTTGACAATCTCCTCACAAGAAGTGCAACTGTAATTCTTGTCCATGTCAAGCTTCAGTCACCTTCTCTTTCTCAATCACCTTCTATTTTCACCCCAAGTGAGTATACCTGGTTAGGGATAAATGTTTTTGGTGAAGAGAGTGTAGCATGTAAAGAACCAGATTGCCAAAACAAAAATGTTTTCCTCCCATATCGTGTCTTCTGTACAAGGAAAGATATACAATGCAAGGATGTCCTACTAGAAGATGTAGATGTATCCAGAGCTTTGATTCAATATGTTGCTCAAGCAGGAATTGAGCATCTGATTCTTGGCTCTTCAACAAAAACTGGTTTGCTCAAAAGATTCAAGGTATCAGATGTTCCAGGAACAGTAGCAAAAGGGGCACCAGATTTCTGTACAGTGTATGTTATTTCTAAAGGGAAGATTCACTCAATGCGATCTGCTTCTCGACCTGCTCCAGGAATTAACCCTGTCCAGGTTGGTCAATTTAGTATCAGATCAGACCAATCAGACTCAGTTGTGTCATTGAAAGAACAAGAAAGGCTCTCCCTTGATGCACCACCACGTAGATCACATGATGAAATAGAAACATTCAGGTCACCATTCACTAGAAAAGGTTACAATGGGAGATCATATGGGGAAACTCCCAAACTAGATTCTGATATATCCTTTGTAAGCACTGGAAGGACAAGTAGTGCAGACCTATACCATTCAATACATAGCAACCCAGATACAGGGATGTCTACCCCTCCACTATCATTTAGTTCAGAAATAGATGGAAACTACAGCTTTGACTCCATTCATCATGCAAGGAGGTCTACGGATATCAATTCTCCTGCTGAATTTGCATCCTTCTCATTTGATAGTGAAAGGCTTTCAACTTCTACATCACAAGCTGTGGATGATATGGAGGCTGAAATGAGGAGATTGAAGTTGGAGCTCAAGCAAACAATGGAAATGTATAACACAGCCTGTAAAGAAGCACTCACAGCACAGCAAAAGGCAGTAGAACTTCAACGTTGGAAATTAGAGGAAGAGAGGAGATTGGAAGAGGCAAGGCTAGCTGAGGAAGCTGCATTGGCAATTGCAGAAAAGGAGAAAGCCAAATCTAAAGCAGCCATTGAGGCTGCTGAAGCACAAAAGAGGATTGCAGAACTAGAAGCACAGAAGAGACTTAATGCAGAAATGAAAGCACTGAAAGAATCAGAAGAGAAAAGAAAAGTACTTGATTCTTTGGTAGGTGTAGATGTCAGGTATAGAAGGTATTCAATTGAGGAGATTGAAGCTGCAACAGAATTTTTCTCAGAGTCCCTCAAGATTGGAGAAGGGGGATATGGTCCAGTTTTTAAGTGCTTTCTGGACCATACATCTGTTGCAGTGAAGGTCCTACGTCCTGATGCAGCACAAGGAATGGCACAGTTTCAAAGAGAGGTAAGCAGAGAAACAAAACTCCACATGTAA 2751 0.4071 MAGMNFEGKHIDGHDVLKIFAAEGVEFLLSCEGKVPLSECSGKIICLFFSANWCRPCRAFIPRLVELYETLRKQGINLEIIFISFDRDEDGFKEHIKNMPWLAVPFDVNLHRRLIDRYRIDRIPSFIPLCSEDLTAEENLIECIEDYGADAFPFTKKRHEELKTIDKRKREEATLEELLAHEGRNFLISGDDRKVPISELAGKTVGLYFCAYWSPPCRAFTIQLTDVYNNLKAEKGHCFEIVLISTDRDLKEFNVNISSMPWLAIPYEDRTRHDLCRIFDVKGIPALVFIGPDGKVISMNGKFMVSSYGADAFPFTESRVRDLEAALRKEGEALPQQVEDVKHEHVLKLDMAKAYVCDSCKKQGKFWTFSCDVCDYDLHPSCLEKDCKSFRTKRGMWLPKNQSEKKDGVNGLIAVAIDKEKGSQNALKWAVDNLLTRSATVILVHVKLQSPSLSQSPSIFTPSEYTWLGINVFGEESVACKEPDCQNKNVFLPYRVFCTRKDIQCKDVLLEDVDVSRALIQYVAQAGIEHLILGSSTKTGLLKRFKVSDVPGTVAKGAPDFCTVYVISKGKIHSMRSASRPAPGINPVQVGQFSIRSDQSDSVVSLKEQERLSLDAPPRRSHDEIETFRSPFTRKGYNGRSYGETPKLDSDISFVSTGRTSSADLYHSIHSNPDTGMSTPPLSFSSEIDGNYSFDSIHHARRSTDINSPAEFASFSFDSERLSTSTSQAVDDMEAEMRRLKLELKQTMEMYNTACKEALTAQQKAVELQRWKLEEERRLEEARLAEEAALAIAEKEKAKSKAAIEAAEAQKRIAELEAQKRLNAEMKALKESEEKRKVLDSLVGVDVRYRRYSIEEIEAATEFFSESLKIGEGGYGPVFKCFLDHTSVAVKVLRPDAAQGMAQFQREVSRETKLHM. 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00805 916 Pfam Universal stress protein family 413 559 IPR006016 -
Seca4g00805 916 Gene3D Glutaredoxin 179 317 - -
Seca4g00805 916 SUPERFAMILY Cysteine-rich domain 334 384 IPR046349 -
Seca4g00805 916 SUPERFAMILY Thioredoxin-like 35 128 IPR036249 -
Seca4g00805 916 SUPERFAMILY Thioredoxin-like 189 298 IPR036249 -
Seca4g00805 916 ProSiteProfiles Thioredoxin domain profile. 1 142 IPR013766 -
Seca4g00805 916 ProSiteProfiles Thioredoxin domain profile. 145 325 IPR013766 -
Seca4g00805 916 Coils Coil 756 836 - -
Seca4g00805 916 CDD STK_N 412 570 - -
Seca4g00805 916 Gene3D HUPs 412 567 IPR014729 -
Seca4g00805 916 Gene3D Phosphorylase Kinase; domain 1 841 916 - -
Seca4g00805 916 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 413 567 - -
Seca4g00805 916 ProSiteProfiles Protein kinase domain profile. 864 916 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca4g00805 916 SUPERFAMILY Protein kinase-like (PK-like) 847 910 IPR011009 -
Seca4g00805 916 Coils Coil 730 750 - -
Seca4g00805 916 CDD TryX_like_TryX_NRX 185 315 IPR045870 GO:0004791
Seca4g00805 916 PANTHER OS02G0152300 PROTEIN 413 909 - -
Seca4g00805 916 Gene3D Glutaredoxin 21 158 - -
Seca4g00805 916 Pfam Thioredoxin-like 42 127 IPR012336 -
Seca4g00805 916 Pfam Thioredoxin-like 202 296 IPR012336 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00805 Seca-Chr4 13389760 13400135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g00805 396 908 Receptor kinase-like Gene Family AT1G78940 47.810 9.48e-125 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00805 - K17609 gmx:100778160 703.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00805 4 13389760 13400135 Seca4g00805 4 13389760 13400135 ECH