Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00804 ATGAGTTGGTGTGAAGGCATTCAGGAACCTCGTGTTCTCGTTGCACCTGATCCTGGTATAAATGGAAATGGTTTAGGACGTATGATATTGCTCCGCCATCCTAAATCTGGTAATGCAACACAATATCTCTTTGTAAATGGGGTGCTTCAAGAACTTCAATGGTTTAAGAACTTATACGGATCTTGGTTTTTGGGAGATTACACAAGTGAAGATGGTCGGATGTATTTATCCACACCAGTTGATCCTGTTTTCATCATGTTGCCCATACTTGATGAAGCTAGAATGAAGAAGGGGGATGATCTCGGGAAGTTCAGGCAGTTGGATGAAATCTTGTTTATTGATGGATTTCCTGGATATCAGCAGTTGATGTCTGTCATGGAGAACTGTTTGCAAGTAGTTTGTGAAGTCAAAGAAGTTGGATCTTTAAAATTCTTTAGGCTTGATGACTCAAAGGTTCTACGTTGGCTATGCTATAAGGTTTGTCAGCTAAAACAGACACTACCCAAATTGGACAAAAACTATGCTGTTCAATCAGAGAAAGACACATTGGTTGATGCAGTCTGTATATTAGGAGAGTATTTGAAGGAAGAACCTTGGTTACAGCTTTTGTGCAACCATCTTAAGTTAAATATACTCGACGTTACTGGAAAAACACAAGTAAATGTTGAAGGAAGTAAGTCAGGTTTATGTAATGAATTACAGGAACAGAGTGATGATAAGAAGGCTACAATTGCAAAGAAGGGTAGGCCAGCAAAGAAGGTAAAATTGGAGACAGAATCACGTAACATAAAAGAGATGTTTTCGAGGGCATCCCGAAAGAAAAGCTAA 828 0.3901 MSWCEGIQEPRVLVAPDPGINGNGLGRMILLRHPKSGNATQYLFVNGVLQELQWFKNLYGSWFLGDYTSEDGRMYLSTPVDPVFIMLPILDEARMKKGDDLGKFRQLDEILFIDGFPGYQQLMSVMENCLQVVCEVKEVGSLKFFRLDDSKVLRWLCYKVCQLKQTLPKLDKNYAVQSEKDTLVDAVCILGEYLKEEPWLQLLCNHLKLNILDVTGKTQVNVEGSKSGLCNELQEQSDDKKATIAKKGRPAKKVKLETESRNIKEMFSRASRKKS. 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00804 275 Gene3D - 11 79 - -
Seca4g00804 275 PANTHER RIBONUCLEASE H2 SUBUNIT B 3 273 IPR040456 GO:0032299
Seca4g00804 275 Gene3D - 80 208 - -
Seca4g00804 275 FunFam Ribonuclease H2 subunit B 80 208 - -
Seca4g00804 275 CDD RNase_H2-B 12 165 IPR040456 GO:0032299
Seca4g00804 275 FunFam Ribonuclease H2 subunit B 9 79 - -
Seca4g00804 275 Pfam Ydr279p protein family (RNase H2 complex component) wHTH domain 84 171 IPR019024 -
Seca4g00804 275 Pfam Ydr279p protein triple barrel domain 27 81 IPR041195 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00804 Seca-Chr4 13382435 13388147 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00804 K10744 - gmx:100305835 491.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00804 4 13382435 13388147 Seca4g00804 4 13382435 13388147 ECH