Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00801 ATGGTTTTCTGGGTTTTTGGCTATGGTTCACTGGTATGGAACCCAGGATTTGACTACGATGAGAAAATTGTTGGTTTCATAAAGGATTACAGACGTGTGTTTGATTTAGCGTGCATTGACCACCGAGGAACACCTGAACACCCTGCAAGAACTTGCACATTAGAGGAGAAAGAAGGGGCAATTTGCTGGGGGGCTGCTTACTGTGTTCGAGGAGGCCCTGAAAAGGAAAAATTGGCTATGCAGGTAAACTTATTTTCACTTGAACAATTTCCAAACTTGAAATAA 285 0.4246 MVFWVFGYGSLVWNPGFDYDEKIVGFIKDYRRVFDLACIDHRGTPEHPARTCTLEEKEGAICWGAAYCVRGGPEKEKLAMQVNLFSLEQFPNLK. 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00801 94 CDD GGCT_like 5 69 IPR013024 -
Seca4g00801 94 PANTHER CATION TRANSPORT PROTEIN CHAC-RELATED 1 80 IPR006840 GO:0006751|GO:0061928
Seca4g00801 94 Gene3D - 2 80 - -
Seca4g00801 94 Pfam ChaC-like protein 3 76 IPR006840 GO:0006751|GO:0061928
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00801 Seca-Chr4 13348485 13349704 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00801 K22596 - gmx:100793027 178.718
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00801 4 13348485 13349704 Seca4g00801 4 13348485 13349704 ECH