Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00791 ATGAGCTTGCAAGTGAACTGTGGAGTGGCAATGGTTGGCGAGAGTCAAGGCCACAACGTGTTCGTCTATGGAAGCCTCTTAGCCGATGAGGTTGTTCGTGTTCTCTTGAACCGTCTCCCTCCTACCGCACCTGCTACTCTCTCCGGCTATCACAGGTTCAAGATCAAAGGTCGCGTTTATCCCGCTATTCTCCCTGTGGAGAATAAGAAAGTTACTGGCAGGGTTCTTCTTGGTATCTCAGGATTGGAACTAGATGTTTTAGATGAGTTCGAGGATGTTGAATACACTAGAAGTGATGTTGAGGTTTCCTTGATGGACAATTCTGAAAAGTTAGAAGTTCACACTTATGTTTGGAGCAACCGAGATGATCCGAACTTATATGGAGAGTGGGATTTTGAGAAGGAATGGAAACAAGTTCACATGAATGATTTCGTCAAGATGACTGATACCTTTATGCGAGAGTTTGAATTGCCAGAAGCAAAGCCAAGAGTTCAGACTTATGAAACCTTCTATAAGCAAGAAAACGATAAGCCACTTGAGCCCTGA 546 0.4414 MSLQVNCGVAMVGESQGHNVFVYGSLLADEVVRVLLNRLPPTAPATLSGYHRFKIKGRVYPAILPVENKKVTGRVLLGISGLELDVLDEFEDVEYTRSDVEVSLMDNSEKLEVHTYVWSNRDDPNLYGEWDFEKEWKQVHMNDFVKMTDTFMREFELPEAKPRVQTYETFYKQENDKPLEP. 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00791 181 CDD GGCT_like 20 118 IPR013024 -
Seca4g00791 181 Pfam Gamma-glutamyl cyclotransferase, AIG2-like 20 131 IPR009288 -
Seca4g00791 181 Gene3D - 125 175 - -
Seca4g00791 181 SUPERFAMILY Gamma-glutamyl cyclotransferase-like 18 141 IPR036568 -
Seca4g00791 181 Gene3D - 8 124 - -
Seca4g00791 181 PANTHER AIG2-LIKE PROTEIN D 15 165 IPR045038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00791 Seca-Chr4 13243806 13246337 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00791 - - gmx:100794072 280.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00791 4 13243806 13246337 Seca4g00791 4 13243806 13246337 ECH