Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00790 ATGTCGGATCAGGCAAGAACAGGGTCTTATGGATCCTATGGATCCTATGACACCAATGTTAACAACCCACCTTCACGCCAAACCGTCAAGTTCATAACTGCTGCTACTATTGGTGTCACACTGTTGCTCCTCTCTGGACTAATCCTCACTGGAACTGTCATAGGCTTAATCATTGCAACCCCTCTTCTTGTTCTGTTCAGCCCCATCTTAGTTCCAGCTGCCATAGTCCTATCCCTTGCTGCTGGTGGCTTTTTGTTCTCAGGTGGCTGTGGTGTGGCTGCTATAGCTGCATTGTCATGGATATATAACTATGTCTCTGGAAACCAGCCTGCAGGTTCTGATACTCTTGATTATGCTAGAGGGGCAATTGCTGATAAGGCTAGGGATGTCAAGGAAAGGGCCAAGGATTATGCCAGTTATGCTCAGGGTAGAGCTCAAGAGACCACACAAGGGTCTACTTATTAA 465 0.4688 MSDQARTGSYGSYGSYDTNVNNPPSRQTVKFITAATIGVTLLLLSGLILTGTVIGLIIATPLLVLFSPILVPAAIVLSLAAGGFLFSGGCGVAAIAALSWIYNYVSGNQPAGSDTLDYARGAIADKARDVKERAKDYASYAQGRAQETTQGSTY. 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00790 154 PANTHER OLEOSIN 19 147 IPR000136 GO:0012511|GO:0016020
Seca4g00790 154 Pfam Oleosin 27 137 IPR000136 GO:0012511|GO:0016020
Seca4g00790 154 ProSitePatterns Oleosins signature. 51 73 IPR000136 GO:0012511|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00790 Seca-Chr4 13241166 13241630 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g00790 19 130 Lipid Metabolism Gene Families AT2G25890 64.286 7.75e-42 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00790 - - gmx:100301903 223.787