Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00778 ATGCCTGAAACCGAGGTAAATCCAACTATCAGCAAGTCAACTGGATTGCCTCGAAAGCGCTTCTATCGAGCACGAGCACACAGCAATCCACTAAGTGACTCTCACTTTCATGTGCAGATATCCCCTAGTCATGTTGAATATTCCCTCCATTACCCTCACTTCTTTCCTTCGTCTGTTCAAGCTGATAGTTCCAGAAAGATAAAGTTTGCTGATATTGGCTGTGGTTTTGGAGGGCTGCTCATCAGTCTCTCCATTATGTTCCCAGAAACACTGATGATTGGAATGGAACTCGGAGATAAAGTATCCGAATATGTCAAGGAACGAATATCATCTTTAAGGGTAGCACATTCAGGTCAATACCAAAATGTTTCTGTGGCACGGACTAACTCCATGAAGTACATTCCCAATTACTTTGAAAAGGGACACTCTCAAAGATGTTTGTCTTGTTTCCTGATCCTCATTTTAAAGAGAAAAATCACCGCTGTCATGTTATCAGTCCATTCTTGCTAG 510 0.4196 MPETEVNPTISKSTGLPRKRFYRARAHSNPLSDSHFHVQISPSHVEYSLHYPHFFPSSVQADSSRKIKFADIGCGFGGLLISLSIMFPETLMIGMELGDKVSEYVKERISSLRVAHSGQYQNVSVARTNSMKYIPNYFEKGHSQRCLSCFLILILKRKITAVMLSVHSC. 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00778 169 Pfam Putative methyltransferase 68 147 IPR003358 GO:0006400|GO:0008176
Seca4g00778 169 Gene3D Vaccinia Virus protein VP39 45 152 IPR029063 -
Seca4g00778 169 ProSiteProfiles SAM-dependent methyltransferase TRMB-type domain profile. 19 169 IPR003358 GO:0006400|GO:0008176
Seca4g00778 169 PANTHER 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/TRNA GUANINE-N 7 - -METHYLTRANSFERASE 16 142 IPR003358 GO:0006400|GO:0008176
Seca4g00778 169 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 64 156 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00778 Seca-Chr4 13030478 13033129 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00778 K03439 - gmx:100806128 250.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00778 4 13030478 13033129 Seca4g00778 4 13030478 13033129 ECH