Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00770 ATGGGTTGCGCTCAATCAAAAATAGATAATGAGGAAACCGTTGCTCGCTGCAAAGAGCGCAAAAACTTGATGAAGGAAGCGGTCGTTGCTCGGAATGCTTTCGCCGCCGGCCACTCCGGCTACTCCATGGCTCTCAAGAACACCGGCGCCGCCCTCAGTGACTACGGCCATGGCGAAACACACATCGACCTCGAACTTCACCCACCGCCTCCTCTCGACGCCGCCTCAAACCCTCCACCACCGCCTCCGCCGCCAATGGAGGATAACCTCCCGCCGCCGCCTCCTCCTCTGCCGAACTTCTCCCCGTCCTCACTTAAGCGCGCTGTCACCATGCCTCCCGCCGTCGCCATGCAGCACCGCAAGGCCAGCCCTGTCGCCATTGCTGAAGAAGAGGAAGGGGAAGGGGAAAACGCCAAGGTGGATGAAGAAGGCGAGGGGTTGAAGAATGGCGCTGCTGGAGCCGCCAGATCGCGAGATGCGCCGCCATCTCCGCCGGAGATGAAGGCGGTGCCGCCTATGCCGGAATCGAAAAACATGGCGTGGGATTACTTTTTCATGGTGGAGAATATGCCAGGACCTTCGCTGAACGGGGAAGAGGAGAATGAGGAAGAGGAAGGTGAAGGTGAAGGTGAGAATGTGGATGGTGATGATGATGGAGGTCACGTGGAGGATGAGGTTGAACCTAAGACACCGGAGAAAGTGCAGGTGCAGGTGGAGGAGCAGGAGCATGAGAATGAGGAGATAACAGAGGCAAAGCACATTGAACATTCCAAGACTGCTCCAGCTGAGTTTAGAAGGGCAATAAAGGTGGTTCCCAGTGTTACTCTGATGCAGATTCTCAATTCCCTTGATGATCACTTTTTGAAAGCCTCAGAAAGTGCTCAGGAAGTTAACAAGTTGCTTGAGGCCACTAGGTTGCATTATCATTCCAATTTCGCTGATAATCGAGGTCACATTGATCATTCTGCTAGGGTTATGCGTGTGATTACTTGGAATAGGTCTTTCAGAGGTGTATCTAATGGTGATGGTGGAAAAGATGATTTTGATTCAGAAGAGTATGAAACACATGCCACTGTTTTGGACAAGTTGTTAGCCTGGGAAAAGAAACTTTATGAAGAGGTGAAGCAAGGTGAGCTTATGAAGTTTGAATATCAGAGAAAAGTTGCAATTCTAAACAAGCAAAAGAAACGTGGTGCCAGTGCTGAATCGTTAGAAAAAACTAAAGCAGCTGTAAGCCATTTACATACAAGATATATTGTTGACATGCAGTCGATGGATTCAACAGTTTCAGAAGTAAACCATATACGTGATGCCCAGTTGTATCCAAAACTTGTTGCTCTTGCTATTGAGATGGCAAACATGTGGGAAGATATGAGTGGACATCATGACAGCCAGCTGAAAATAGTTACAGAACTCAAATCCCTTGATATTTCCCAAGCTCCTAAGGAAACAACCAAGCAACACTATGACCGAACTGTGCAACTTTGGAATGTCATCCAAGAATGGCATTCACAATTCGAGAAGCTTGTGACTCAACAGAAACAGTACATTCAAGCTCTTCATAGCTGGCTAAAGTTAAATCTCATCCCTATTGAAAGCAACCTAAAAGAGAAAATCTCATCCCCACCAAAAGCCCCGAATCCACCGATCCAAGCCCTTCTCCATGCATGGCATGATTATCTTGACAAGCTTCCTGATGAGCTTGCAAAATCTGCTATTTCCTCCTTTGCTGCTGTGATAAAGACTATCATAATTCAACAGGAAGAAGAGATGAAGTTAAAGGAAAGATGTGAGGAAACCAGAAGGGAATATTTGAGGAAAAAACAAGCCTTTGAGGAATGGTACCAGAAGCATTTACTACGGAGGGGGCCTGAAGAAGCAGACCATGAAAGAGGGGAGGAAGTAAATACAAACAATCCTGTCTCAGAGAAGCAGTTTGTTGTTGAAAGCTTGAAGAAGCGATTAGAAGAGGAAGTTGAATCTCACCAAAAACTCTGTATTCAGGTACGAGAGAAATCACTCCAAAGTCTCAAAACACGCTTGCCTGAGGTCTTCCGTGCATTGTCAGACTATACTCATGCATGTGCTGATGCTTATGACAAACTGAAGTCAATCACACAGCCCCGGGAGGGTGTGGCATGA 2142 0.4729 MGCAQSKIDNEETVARCKERKNLMKEAVVARNAFAAGHSGYSMALKNTGAALSDYGHGETHIDLELHPPPPLDAASNPPPPPPPPMEDNLPPPPPPLPNFSPSSLKRAVTMPPAVAMQHRKASPVAIAEEEEGEGENAKVDEEGEGLKNGAAGAARSRDAPPSPPEMKAVPPMPESKNMAWDYFFMVENMPGPSLNGEEENEEEEGEGEGENVDGDDDGGHVEDEVEPKTPEKVQVQVEEQEHENEEITEAKHIEHSKTAPAEFRRAIKVVPSVTLMQILNSLDDHFLKASESAQEVNKLLEATRLHYHSNFADNRGHIDHSARVMRVITWNRSFRGVSNGDGGKDDFDSEEYETHATVLDKLLAWEKKLYEEVKQGELMKFEYQRKVAILNKQKKRGASAESLEKTKAAVSHLHTRYIVDMQSMDSTVSEVNHIRDAQLYPKLVALAIEMANMWEDMSGHHDSQLKIVTELKSLDISQAPKETTKQHYDRTVQLWNVIQEWHSQFEKLVTQQKQYIQALHSWLKLNLIPIESNLKEKISSPPKAPNPPIQALLHAWHDYLDKLPDELAKSAISSFAAVIKTIIIQQEEEMKLKERCEETRREYLRKKQAFEEWYQKHLLRRGPEEADHERGEEVNTNNPVSEKQFVVESLKKRLEEEVESHQKLCIQVREKSLQSLKTRLPEVFRALSDYTHACADAYDKLKSITQPREGVA. 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00770 713 MobiDBLite consensus disorder prediction 60 174 - -
Seca4g00770 713 Coils Coil 652 672 - -
Seca4g00770 713 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Seca4g00770 713 MobiDBLite consensus disorder prediction 197 221 - -
Seca4g00770 713 Pfam Protein of unknown function (DUF632) 276 581 IPR006867 -
Seca4g00770 713 MobiDBLite consensus disorder prediction 190 232 - -
Seca4g00770 713 PANTHER UNCHARACTERIZED 1 704 - -
Seca4g00770 713 MobiDBLite consensus disorder prediction 71 101 - -
Seca4g00770 713 Coils Coil 583 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00770 Seca-Chr4 12973133 12977085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g00770 1 603 Acyl Lipid Metabolism Gene Families AT2G27090 24.821 1.07e-41 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00770 - - gmx:100807189 1022.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00770 4 12973133 12977085 Seca4g00770 4 12973133 12977085 ECH