Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00768 ATGGAGTACCCTCTCCTATCCCTTTTTGCTTTACTCAATGTTGTGGTGGTGGCAACCCATGGTGCCTTACCTCCTGAACTTTACTGGAAGTCTGTGCTTCCTACTACGCCAATGCCAAAAGCCATCACTGATATCCTTCACCCAGCAGATTTGGTGGAAGACAAAAGCACCAATGTAGGTGTAGGGAAGGGTGGTGTAAGTGTTACTACGGGGAAAGGAAAGCCCGGAGGCACTTCAGTGAATGTTGGAAACGGAAAAGGAGGTGTAAATGTGCATACAGGAAAAGGAAGTGGTACCAATGTCAACGTTGGTGGAAAAGGTGGAGTTTCAGTAAGTGCGGGCCATAAAGGAAAGCCCGTCTATGTCACAGTTGGGCCAAAGAGCCCATTTCTTTACCGATATGCTGCAACTGAGACCCAATTACACGATGACCCCAATGTGGCACTCTTCTTCTTGGAAAAAGACTTGCATCCTGGAACCAAGTTGGGCTTGCACTTCACTAAGAGCTCAAATGCAGCCACATTCTTGCCTCGCCAAGTTGCGGATTCAATTCCCTTTTCATCAAACAAGGTGGAAGATATATTCAACAAGTTTTCTGTCAAGCCCGGGTCAGAGGAAGCCCAAGTCATAAAGAACACTATTAATGAGTGTGAAGAAGCAGGGATTAAAGGAGAGGAAAAGTATTGTGCAACTTCACTAGAATCCATGGTTGATTTTGGCACTTCCAAGATTGGAAAAAATGTTGAGGTTGTGTCTACCGTGGTAGACAAAGAAACAGGGTTGCAAAAATACACCATGACTCCAGGGGTTAAGAAGTTAGCAGGGGACAAGGCTGTTGTGTGCCACAAGCAGAATTATCCATATGCTGTATTTTACTGTCACAAGACAGAGACTACAAGAGCTTACTCTGTGCCTTTGGAAGGTGTTGATGGGATTAGAGTTAAAGCAGTTGCAGTGTGCCACACAGACACATCACAATGGAATCCCAAGCATTTGGCCTTTCAAGTGCTCAAAGTTAAGCCAGGAACTGTTCCAGTTTGCCACTTCCTTCCTGAGGATCATGTTGTTTGGGTTCCTAAGTAG 1083 0.4534 MEYPLLSLFALLNVVVVATHGALPPELYWKSVLPTTPMPKAITDILHPADLVEDKSTNVGVGKGGVSVTTGKGKPGGTSVNVGNGKGGVNVHTGKGSGTNVNVGGKGGVSVSAGHKGKPVYVTVGPKSPFLYRYAATETQLHDDPNVALFFLEKDLHPGTKLGLHFTKSSNAATFLPRQVADSIPFSSNKVEDIFNKFSVKPGSEEAQVIKNTINECEEAGIKGEEKYCATSLESMVDFGTSKIGKNVEVVSTVVDKETGLQKYTMTPGVKKLAGDKAVVCHKQNYPYAVFYCHKTETTRAYSVPLEGVDGIRVKAVAVCHTDTSQWNPKHLAFQVLKVKPGTVPVCHFLPEDHVVWVPK. 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00768 360 ProSiteProfiles BURP domain profile. 150 360 IPR004873 -
Seca4g00768 360 MobiDBLite consensus disorder prediction 63 86 - -
Seca4g00768 360 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 18 359 IPR044816 -
Seca4g00768 360 SMART BURP_2 148 360 IPR004873 -
Seca4g00768 360 Pfam BURP domain 149 359 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00768 Seca-Chr4 12935110 12939199 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00768 - - gmx:100799031 543.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00768 4 12935110 12939199 Seca4g00768 4 12935110 12939199 ECH