LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca4g00766	ATGGACTATTGCTTGTTGAGAGAGATAGAAGGAAAACAAGCACATGATCCTTTATTCATTGACAAAATGAATAACAACAAATCATCCTCCACTGTGTGGATTCCAGGTCCTGTGATTGTAGGTGCAGGACCTTCAGGTCTTGCAGTAGCAGCATGTCTCAAACAAAAAAGTGTGCCATGTGTAATACTAGAGAGATCTAATTGCATAGCTTCTCTTTGGCAACTTAAGACCTATGATCGTCTACGCCTTCATTTACCAAAGCAATTCTGTGAGCTTCCTTTTATGGGGTTCCCTGATGAATTCCCAACATACCCATCAAAGAAACAGTTCATAGAGTACTTGGAGAATTATGCAGAAAGGTTTGGTATTAGGCCAAAGTTCAATGAGACAGTGAAACATGCTGAATTTGATGTCAATATTGGGTGTTGGCGTTTGAAGAGTTTTAACAAAGCAGAGAAGATGACAGAGTATGTGTGCAGGTGGTTGATTGTGGCTACAGGAGAGAATGCAGAAGCTGTGGTGCCTGATATTGAAGGAATAGAGGAATTTGAAGCACCAATAAGGCATACAAGTTTGTATAAAAGTGGTGAAGAATTCAGAGGGAAGAGGGTTTTGGTAGTGGGGTGTGGGAATTCAGGCATGGAAGTGTGTTTGGATCTTTGCAACCATAATGCTACTCCTTCTCTTGTGGTCAGAGATTCAGTACACGTCCTACCACGAGAGATGCTGGGAAAATCAACTTTCGGGTTGTCCATGTGGTTGCTCAAGTGGTTACCCATGAGAGTTGTCGATGGGTTCCTTCTCATAGTGTCATGGCTTATGCTCGGTGACACTTCTCAATTCGGATTGGATAGGCCGCGTTTGGGTCCCCTTCAACTCAAAAACCTGTCCGGAAAGACCCCTGTGCTTGATGTGGGTACCCTTTCCAAGATTAAAGCTGGACACATTAAGGTGCGTCCAAGCATAAAGCGACTAAAAGGACATACAGTGGAATTTGTAGATGGAAGGATGGAGAATTTTGATGCTATCATATTGGCAACTGGTTACAAAAGCAATGTACCCTATTGGCTTAAGGAAGGGGATATGTTCTCGAAGGAAGATGGATTCCCAAAGAGGCCATTCCCAAATGGGTGGAAAGGTGAGAATGGGCTCTATGCGGTGGGTTTTACAAAGAAGGGATTGCTTGGTGCATCTATGGATGCCAAGAGAATAGCTGATGATATTGAACGGTGTTGGGAAGCTGATGAGGCAAAGCATAGAGCTGCTTTTTCTCGCTCAATTTTGTCACAATCAAATTCATAA	1302	0.4301	MDYCLLREIEGKQAHDPLFIDKMNNNKSSSTVWIPGPVIVGAGPSGLAVAACLKQKSVPCVILERSNCIASLWQLKTYDRLRLHLPKQFCELPFMGFPDEFPTYPSKKQFIEYLENYAERFGIRPKFNETVKHAEFDVNIGCWRLKSFNKAEKMTEYVCRWLIVATGENAEAVVPDIEGIEEFEAPIRHTSLYKSGEEFRGKRVLVVGCGNSGMEVCLDLCNHNATPSLVVRDSVHVLPREMLGKSTFGLSMWLLKWLPMRVVDGFLLIVSWLMLGDTSQFGLDRPRLGPLQLKNLSGKTPVLDVGTLSKIKAGHIKVRPSIKRLKGHTVEFVDGRMENFDAIILATGYKSNVPYWLKEGDMFSKEDGFPKRPFPNGWKGENGLYAVGFTKKGLLGASMDAKRIADDIERCWEADEAKHRAAFSRSILSQSNS.	434

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca4g00766	433	PANTHER	FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220)	38	417	-	-
	Seca4g00766	433	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	36	58	-	-
	Seca4g00766	433	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	199	223	-	-
	Seca4g00766	433	SUPERFAMILY	FAD/NAD(P)-binding domain	38	243	IPR036188	-
	Seca4g00766	433	Pfam	Flavin-binding monooxygenase-like	39	356	IPR020946	GO:0004499\|GO:0050660\|GO:0050661
	Seca4g00766	433	FunFam	Flavin-containing monooxygenase	37	417	-	-
	Seca4g00766	433	PRINTS	FAD-dependent pyridine nucleotide reductase signature	37	56	-	-
	Seca4g00766	433	PRINTS	FAD-dependent pyridine nucleotide reductase signature	203	221	-	-
	Seca4g00766	433	SUPERFAMILY	FAD/NAD(P)-binding domain	200	410	IPR036188	-
	Seca4g00766	433	Gene3D	-	37	417	IPR036188	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca4g00766	Seca-Chr4	12846373	12850028	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca4g00766	K11816		-	gmx:100799546	752.281