Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00764 ATGGTTCTTCTTCACAACCCCAGGTTCCCTCTTTCCTTTCTAAGTTTAACCTCTTCCCATTCAAACCCTCTCCGAGCTTATTCGACTCCCTCCATAAACACCCTCTTATATCCACCCAAATCCGTTCTCACCACCTCAGAACCCGTTCCCATAACCCCTTCTTCCCCTCCAGAGTTATCCCTCGAGAAGCTCTTTGTTCCGCCGGAGACCCCTGTCTCACTCGACGGAGCCAGAATCTTGAACGGTTCCAACATATTGCTGAGTAACTACGCCAGTGATGCTCAAGTCCTTCAAGCCGATTTCGTTAAAAGCAGCGTCAGAACCGAGGATTGCCCCTCTGATGGCCTCCCTGAGTTCGCTCTCGTTGGACGCTCCAACGTCGGCAAATCATCACTCCTCAATTCTCTCGTGCGCCGCAAGAAACTCGCCTTAACTTCAAAGAAACCTGGCAAGACACAATGCATCAACCATTTTCGGATTAATAATAACTGGTACCTGGTTGATTTGCCTGGATATGGGTATGCATCTGCACCGCAGGAACTTAGAATGGATTGGGAAAAATTCACCCAAGACTATTTCCTTAACCGGTCAACCTTAGTTTCGGTTTTCCTTCTAATAGATGCTAGCATTCCTGCTAAAAAAATTGATCTTGAGTATGCCAGTTGGTTGGGTCAGAATCAGGTCCTGTAG 690 0.4754 MVLLHNPRFPLSFLSLTSSHSNPLRAYSTPSINTLLYPPKSVLTTSEPVPITPSSPPELSLEKLFVPPETPVSLDGARILNGSNILLSNYASDAQVLQADFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFRINNNWYLVDLPGYGYASAPQELRMDWEKFTQDYFLNRSTLVSVFLLIDASIPAKKIDLEYASWLGQNQVL. 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00764 229 ProSiteProfiles EngB-type guanine nucleotide-binding (G) domain profile. 115 229 IPR030393 GO:0005525
Seca4g00764 229 PANTHER MSS1/TRME-RELATED GTP-BINDING PROTEIN 34 228 - -
Seca4g00764 229 Pfam 50S ribosome-binding GTPase 119 223 IPR006073 GO:0005525
Seca4g00764 229 NCBIfam ribosome biogenesis GTP-binding protein YihA/YsxC 99 227 IPR019987 GO:0005525
Seca4g00764 229 Gene3D - 91 228 IPR027417 -
Seca4g00764 229 CDD YihA_EngB 118 228 IPR030393 GO:0005525
Seca4g00764 229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 110 225 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00764 Seca-Chr4 12811964 12815686 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00764 K03978 - gmx:100784426 369.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00764 4 12811964 12815686 Seca4g00764 4 12811964 12815686 ECH