Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00753 ATGTCTTCAGCCCATGTCTATGTCAGGCTGCACAAAGGTCAGACTATTGATGACATGAGTGAAGGTTTACTGGAAGACTGTGCTCAGCTTGTCAAAGCAAATTCAATTCAAGGAAATAAAGTGAACAATATTGACGTTGTTTACACTCCCTGGGCCAATTTAAAGAAAACTGCTTCGATGGACGTTGGTCAAGTTGGTTTCCACAACCCAAAAATGGTGCGAACTATGAGAGTGGAGAAGAGGATAAATGAGATTGTTAACAGGCTAAACAAGTCAAAGGTGGAGAGAAAACCTGATTTGAAAGCTGAGAGAGAAGCAGTCAATGCAGCTGAAAGAGCAGAGAGAAAACAAATACTGAGAGAAAAGAAACGCCGCGAGGAATTGGAAAGACTAGACAAGGAGAGACAAGCAGAGCTTAGGAGCTACAAGGGTTTGATGGTCGCAGAAAATATGACATCCAACAAACACATTGCATCAGGAAGCAAATCGTTGCAGGAACTGGAGGAAGATTTCATGTAA 519 0.42 MSSAHVYVRLHKGQTIDDMSEGLLEDCAQLVKANSIQGNKVNNIDVVYTPWANLKKTASMDVGQVGFHNPKMVRTMRVEKRINEIVNRLNKSKVERKPDLKAEREAVNAAERAERKQILREKKRREELERLDKERQAELRSYKGLMVAENMTSNKHIASGSKSLQELEEDFM. 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00753 172 PANTHER DUF814-RELATED 1 172 IPR039730 -
Seca4g00753 172 Pfam NFACT protein RNA binding domain 2 69 IPR008532 -
Seca4g00753 172 MobiDBLite consensus disorder prediction 153 172 - -
Seca4g00753 172 Coils Coil 111 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00753 Seca-Chr4 12661772 12665210 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00753 K26405 - gmx:100802228 288.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00753 4 12661772 12665210 Seca4g00753 4 12661772 12665210 ECH