Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00747 ATGGCGAACCAGGATTACGAAGATCAGCGCCAGCAACCTCAAGAGTTGGGGTATGACCCGAACTTCGTACCGGACTCGGTGAAGTCATTCGTGGTGCACCTCTACCGTCACATCCGTGAGAAAAATGTTTACGAGATCCACCAGATGTACGAGAGCTCCTTCCAGACCCTATCGGATCGTCTCTTCAAGGACACACCCTGGCCCTCCGTCGACGCCGTCGCTCACTACGTCGACAACGACCACGTCTTTTGCCTCCTCTACCGCGAGATGTGGTTCCGCCACCTCTATGCCCGCCTCACCCCAACCCTCCGCCAGAGGATCGATTCCTGGGATAACTACTGCAGCCTCTTCCAGGTCGTCCTCCACGGCGTCGTCAACATGCAGCTCCCCAACCAATGGCTCTGGGATATGGTGGACGAATTCGTTTACCAGTTTCAGAGCTTCTGTCAGTACCGTGCCAAGATGAAGAACAAAACCGAACAAGAAATTGCTCTATTGAGGCAATTTGATCAGGCTTGGAATGTTTATGGTGTTCTCAACTTCTTGCAAGCGCTTGTTGAGAAGTCTGCAATCATTCAGATTCTTGAGCAAGAGAAGGAAGGACTCGAGCAATTCACTGCTACTGATGGCTATGATTACAATGGAGGCAGCAATGTCTTGAAGGTTTTAGGGTATTTCAGCATGGTTGGCTTGCTGAGGGTCCATTGTCTTTTGGGTGATTATCATACTGGTCTCAAGTGCCTGCTTCCTATTGATATTAGTCAGCAAGGGGTTTACACCAGTGTTATTGGCAGCCACATTACCACCATTTATCACTATGGTTTTGCCAATCTTATGCTCCGCAGATATGTGGAAGCTATTAGTGAATTTAACAAAATTCTCTTGTACATCTATAAGACGAAGCAGTACCATCAGAAATCGCCACAATATGAGCAGATACTGAAGAAGAATGAACAAATGTATGCCTTGCTAGCTATTTGCCTTTCACTCTGCCCCCAAAGCAGGCTTGTTGATGAAACTGTGAACTCTCAATTGCGAGAAAAGTATGGTGAAAAGATGATTAGAATGCAACGATATGACGATGAAGCATTTGCTATGTATGATGAGCTCTTCTCATATGCATGTCCCAAGTTTATCACCCCATCAGCACCTAGTTTCGAGGAACCTCTAGTAAATTACAACCAGGATGCATATAGACTTCAATTGAAACTGTTCCTTTATGAAGCAAAGCAACAACAGTTGTTATCAGGTGTCCGGACCTTCTTGAAAGTGTATTCAACAATCTCCCTTGCAAAACTTGCAAGCTACATGGAAGTGGATGAACCCACCTTAAGGACTATCTTGATGACATACAAACATAAGACACATGCTGTTGACAGTGATGGAAAAATTATATCCAATGCTGATGTTGATTTCCATATTGATGATGACATGATTCATGTTGTTCAGTCTAAACCTGCCAAACGATATGGGGATTACTTTTTGCGTCAGATTGTCAAGCTTGAAGGGGTGATCAATGAGATGGACAGTATAAAGCTTGAGTGA 1545 0.4492 MANQDYEDQRQQPQELGYDPNFVPDSVKSFVVHLYRHIREKNVYEIHQMYESSFQTLSDRLFKDTPWPSVDAVAHYVDNDHVFCLLYREMWFRHLYARLTPTLRQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWDMVDEFVYQFQSFCQYRAKMKNKTEQEIALLRQFDQAWNVYGVLNFLQALVEKSAIIQILEQEKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLLPIDISQQGVYTSVIGSHITTIYHYGFANLMLRRYVEAISEFNKILLYIYKTKQYHQKSPQYEQILKKNEQMYALLAICLSLCPQSRLVDETVNSQLREKYGEKMIRMQRYDDEAFAMYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEAKQQQLLSGVRTFLKVYSTISLAKLASYMEVDEPTLRTILMTYKHKTHAVDSDGKIISNADVDFHIDDDMIHVVQSKPAKRYGDYFLRQIVKLEGVINEMDSIKLE. 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00747 514 Hamap Eukaryotic translation initiation factor 3 subunit L [EIF3L]. 6 503 IPR019382 GO:0003743|GO:0005737|GO:0005852
Seca4g00747 514 MobiDBLite consensus disorder prediction 1 20 - -
Seca4g00747 514 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 5 512 IPR019382 GO:0003743|GO:0005737|GO:0005852
Seca4g00747 514 ProSiteProfiles PCI domain profile. 289 488 IPR000717 -
Seca4g00747 514 Pfam RNA polymerase I-associated factor PAF67 105 500 IPR019382 GO:0003743|GO:0005737|GO:0005852
Seca4g00747 514 MobiDBLite consensus disorder prediction 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00747 Seca-Chr4 12553744 12557898 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00747 K15029 - gmx:100804691 1013.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00747 4 12553744 12557898 Seca4g00747 4 12553744 12557898 ECH