Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00732 ATGGAAACCAAGCTGTGTGAACCTCCGCACTTTCCCTTATCCACCGCCAATGTCAGACGCACTCATCGTCGCGCTTCTCTCAAACTCCCGTTTCCATCAACAACGTGGCGCCTCGTTGCTCACAGTTCCATCTCAGGTAGCGACCCCACTGCCACAACCATTGAAGCACCGCAATCTCAATCTATCAAACCAATTTACTCCCCAACCCCTCCCAATCGAGACCTTCGAACCCCTCACAGCGGGTACCATTTCGATGGGAGTGCCCGAAAATTCTTTGAGGGTTGGTACTTCAAAGTGTCCATTCCGCAACGGAGGCAGAGCTTTTGCTTTATGTATTCCGTGGAGAGTCCCGCTTTCACTAAGCCATTGACGCCATTGGAATTGGCACAATATGGACCCAGATTTACTGGTGTTGGGGCTCAAATTCTTGGTGCTGATGATAAATACATTTGCCAATACTCTCCCGAATCACAGTACTTTTGGGGAAGTGAGCATTTTTTGCACTCTCTTATTTTAATTTGTTTGGACTTACTAGTTAATGATGTTTTTAAATGCTTAGGCAGGCATGAACTGATGCTGGGAAACACTTTTGTGGCCAAGCAAAATTTGAAACCTCCAAACAAGGAGGTTCCTCCTGAGGAATTTGATAAAAGAGTGTTGGAAGGTTTTCAAGTCACTCCCCTTTGGCATCAAGGTTTCATTTGCGATGATGGAAGGTCAAATTATGTAGAAACAGTGAAGACAGCTCGTTGGGAGTATAGTACACGTCCTGTATATGGTTGGGGTGATGTTGGGTCCACACAGAAGTCTACTGCTGGCTGGCTTGCAGCTTTTCCTGTTTTTGAACCACATTGGCAAATATGCATGGCTGGTGGACTGTCTACAGGCATGTGCTGGCTTGTTCAGCTATTGGCTATTCAATCTTTTATTTGTATCATGAGTTGGATAGAATGGGATGGCGAGAGGATTGAGTTTGAAAATGCCCCATCTTATTCAGAAAAGAACTGGGGTGGAGCATTCCCAAGAAAATGGTTTTGGGTTCAGTGTAATGTTTTTGAAGGTGCTAGTGGAGAAATTGCACTTACAGCTGCTGGTGGATTAAGGCAAATCCCTGGAATAACTGAGAACTTTGAAAATGCTGCATTGATTGGAGTTCATTATGGTGGAAAATTTTATGAATTTGTGCCATGGAATGGTTTTGTTAACTGGGAAGTTGCTCCTTGGGGTTATTGGTTTATGTCTGCAGACAATGGCAGATATGTGGTCGAATTAGAAGCAAAAACAGAGGATCCAGGTACCACATTGCGTGCTCCAACAGCAGAAGCTGGCCTTTCCCAAGCTTGTAAAGATACATGCTTTGGAATTCTAAAATTACAAATGTGGGAACGAAGATATGATGGCAGCAAGGGGAAGATCATATTGGACGTTTCAAGTGACATGGCAGCTCTAGAAGTTGGAGGAGGTCCATGGTTTAACACTTGGAAGGGCAAGACGTCAACTCCTCCAGCCCTTAGCCGTGCTATTGGATTACCCATTGACCTAGATGGCATTTTTAATTCGGTTCCTCTGTTTAAACCACCTGGTTTGTAG 1590 0.4459 METKLCEPPHFPLSTANVRRTHRRASLKLPFPSTTWRLVAHSSISGSDPTATTIEAPQSQSIKPIYSPTPPNRDLRTPHSGYHFDGSARKFFEGWYFKVSIPQRRQSFCFMYSVESPAFTKPLTPLELAQYGPRFTGVGAQILGADDKYICQYSPESQYFWGSEHFLHSLILICLDLLVNDVFKCLGRHELMLGNTFVAKQNLKPPNKEVPPEEFDKRVLEGFQVTPLWHQGFICDDGRSNYVETVKTARWEYSTRPVYGWGDVGSTQKSTAGWLAAFPVFEPHWQICMAGGLSTGMCWLVQLLAIQSFICIMSWIEWDGERIEFENAPSYSEKNWGGAFPRKWFWVQCNVFEGASGEIALTAAGGLRQIPGITENFENAALIGVHYGGKFYEFVPWNGFVNWEVAPWGYWFMSADNGRYVVELEAKTEDPGTTLRAPTAEAGLSQACKDTCFGILKLQMWERRYDGSKGKIILDVSSDMAALEVGGGPWFNTWKGKTSTPPALSRAIGLPIDLDGIFNSVPLFKPPGL. 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00732 529 PANTHER - 51 529 IPR025893 GO:0009976
Seca4g00732 529 Pfam Tocopherol cyclase 89 166 IPR025893 GO:0009976
Seca4g00732 529 Pfam Tocopherol cyclase 188 487 IPR025893 GO:0009976
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00732 Seca-Chr4 12378464 12383320 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00732 K09834 - gmx:100809310 837.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00732 4 12378464 12383320 Seca4g00732 4 12378464 12383320 ECH