Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00726 ATGAAAAGCAAGCATATGGCAGGAACATTCACGAAAAAGAAGAAATATATAGTCACTGGAGTTTGCAGTGATATCCCAGCTTGGCCCGGAAGGGAGAAGGAAGATGTCAGTGAAAAGAGGGCATATTTTGGAATAAAAACAGCAGACAGGATAATAGAATTTGAATGTGGAAGTAAAGGAGACAAACAGTTCTGGCTTGAGGGGATCCAGTACATGTTGAGTTGCCGTGCCAAAGTAACATAA 243 0.4115 MKSKHMAGTFTKKKKYIVTGVCSDIPAWPGREKEDVSEKRAYFGIKTADRIIEFECGSKGDKQFWLEGIQYMLSCRAKVT. 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00726 80 Pfam Plant pleckstrin homology-like region 1 76 IPR013666 -
Seca4g00726 80 SUPERFAMILY PH domain-like 35 74 - -
Seca4g00726 80 PANTHER EXPRESSED PROTEIN 1 77 IPR040269 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00726 Seca-Chr4 12196426 12197226 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00726 - - gmx:100814154 162.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00726 4 12196426 12197226 Seca4g00726 4 12196426 12197226 ECH