Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00725 ATGAAGCAATTATACATCAAATTTATAAATTCTATGAACAAATTACCAAATTTTACGCAAAATAACAGAGTAAATCCACTTGAATTGTGGATTTATTTTTCAGCTCTCCCACAATCCCAGTTATTTAGCGCAAAAGGATCGGAGTTGTTTAAAGTCGCAGAAGCTACTGCTGCAGAAAAGCTAGCCCAACCAGAGCAAAATTTGTTTGACTGGCTCAATAATGACAACCGAAGATTTCTCCATGTCGTATACCGTGTTGGAGACTTGGAGAAGACTATAAAGTTCTACACTGAATGTCTTGGAATGAAGCTATTGAGAAAACGTGACATTCCAGAAGATAGATATACAAACGCTTTTCTTGGATATGGGCCTGAAGATTCCAATTTTACAGTTGAACTTACTTACAATTATGGGATGGATAACTATGACATTGGAACTGGTTTTGGTCATTTTGGTATTGTAGCTGAAGATGTTTCCAAAACAGTAGATCTAATAAAAGCAAAAGGGGGAAAGGTTACCAGGGAAGCAGGGCCTGTCAAAGAAGATCCTGATGGTTATAAGTTTGAGCTTTTGGAGGGAAGACTTACTCCTGAACCCTTATGCCAAGTGATGCTTCGAGTTGGTGATCTTGATCGTGCCGTGGCCTTCTATCAAAAAGCTCTTGGCATGAAACTTCTTAGCAAGAGGGACAACCTGGAGCAAAAGTACACAGAAGCCGTGATGGGCTATGGACCTGAAGCTAATAATCCTGTTCTAAAGCTGACATATAACTATGGTGTTACTAATTATGACAAAGGAAATGGTTATCAACAGATTGCAATAGGCACAAATGATGTCTATAAGACTGCTGAGGCAGTCAAATTGTGTGGAGGGAAGATTATCCGTGAACCTGGGCCCTTGCCAGGTATCAACACCAAGATCGTGGTTTGCTTGGACCCTGATGGCTGGAAATTGGTATTTGTTGATAATGTTGATTTTCTGAAGGAATTAGAGTGA 996 0.3966 MKQLYIKFINSMNKLPNFTQNNRVNPLELWIYFSALPQSQLFSAKGSELFKVAEATAAEKLAQPEQNLFDWLNNDNRRFLHVVYRVGDLEKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSNFTVELTYNYGMDNYDIGTGFGHFGIVAEDVSKTVDLIKAKGGKVTREAGPVKEDPDGYKFELLEGRLTPEPLCQVMLRVGDLDRAVAFYQKALGMKLLSKRDNLEQKYTEAVMGYGPEANNPVLKLTYNYGVTNYDKGNGYQQIAIGTNDVYKTAEAVKLCGGKIIREPGPLPGINTKIVVCLDPDGWKLVFVDNVDFLKELE. 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00725 331 ProSitePatterns Glyoxalase I signature 1. 81 102 IPR018146 GO:0004462|GO:0046872
Seca4g00725 331 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 199 323 IPR037523 -
Seca4g00725 331 NCBIfam lactoylglutathione lyase 79 192 IPR004361 GO:0004462|GO:0046872
Seca4g00725 331 Gene3D - 196 331 IPR029068 -
Seca4g00725 331 FunFam Lactoylglutathione lyase 196 331 - -
Seca4g00725 331 Gene3D - 50 193 IPR029068 -
Seca4g00725 331 PANTHER LACTOYLGLUTATHIONE LYASE 60 331 - -
Seca4g00725 331 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 77 194 IPR029068 -
Seca4g00725 331 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 78 202 IPR037523 -
Seca4g00725 331 ProSitePatterns Glyoxalase I signature 1. 202 223 IPR018146 GO:0004462|GO:0046872
Seca4g00725 331 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 200 323 IPR029068 -
Seca4g00725 331 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 79 189 IPR004360 -
Seca4g00725 331 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 202 319 IPR004360 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00725 Seca-Chr4 12193543 12198847 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g00725 202 322 Calmodulin-binding Proteins AT1G08110 26.027 4.16e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00725 K01759 - gmx:100810908 529.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00725 4 12193543 12198847 Seca4g00725 4 12193543 12198847 ECH