Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00721 ATGATGAAGGGCCAAGCAAGTGTTGTGTTGCATCTAAACGCAACAGAAAAAGAGATGGCAACTCCGTACTGCAGGGTTGTTGCACCGAGTTGTTCCATGCATGAGAAACGTCCCTTTGTCGTCCCACACAGAGTTAAACATTCCATGACTCTACCACTTTCCTCCATATTCAAGCCGATCCTAAGAGCTTTGCCTCAAATTCTTCCACTGCAAATGGAAGACATAAAAGCTAAATTCCTTGACGCTGTTGTGGATTCCCTATTTGAGTACGTCGACCACCCACTGCTTCCATCTCAGAGTAACTTTGGTCCAGTGGAGGAGATAGGGGAAGCCATTCCTATCACTAACAATAACATCCAAGGCCAAATACCAAATCACTTTCCAGAGGGTGTCTACATTAGAAATGGATCAAACCCACTGTTCGGAGGACTGAAATCAACCAAGTCAATGATGGGAAGGTCAAAAAGCGTTTGGGTGGAAGGAGAAGGAATGCTTCATGCTTTGTATTTCCTAAAGCAAAGTGACGACGGAAGCTACACTGTCGTCTACAATAACAGATACGTTGAAACTGCAACATACAAGCTTGAGAAACAAAGCAATAAGCCTTTGTTTCTCCCTGCTGTCAGAGGAGATTCATTGGCTGTTCTCTCTTCTCTTCTGTTAAACCAGTTGAGATTTGGAAAACAGTACAAATATTATAGCAACACCAATGTGTTCGAGCATTCAGGGAAGTTCTACTCGGTTGCTGAAAGTCACATCCCACAAGAGATTGACATCTTCACACTAAGTACTTTAAAGGACTGGGATGCCAATGGAGCCTGGAATCGTCCTCTTTGCAGTCACCCAAAGAAAGTTCCAGGTACAGGAGAGCTGGTTATATTTGGGGTAGAAGCTACTAAACCTTTTCTTGAAGTTGGAATAGTTTCTGCTGATGGAATGGAATTGGTTCATAAAGTGGATATCAATCTAGACAGGTGCTCTCTTTGCCATGAGATTGGTGTCACACACAGGTACATTGCCATATTGGATTTTCCACTGATTATAGATTTAAACAGACTACTAAAAAGAGGCCCGTGA 1077 0.429 MMKGQASVVLHLNATEKEMATPYCRVVAPSCSMHEKRPFVVPHRVKHSMTLPLSSIFKPILRALPQILPLQMEDIKAKFLDAVVDSLFEYVDHPLLPSQSNFGPVEEIGEAIPITNNNIQGQIPNHFPEGVYIRNGSNPLFGGLKSTKSMMGRSKSVWVEGEGMLHALYFLKQSDDGSYTVVYNNRYVETATYKLEKQSNKPLFLPAVRGDSLAVLSSLLLNQLRFGKQYKYYSNTNVFEHSGKFYSVAESHIPQEIDIFTLSTLKDWDANGAWNRPLCSHPKKVPGTGELVIFGVEATKPFLEVGIVSADGMELVHKVDINLDRCSLCHEIGVTHRYIAILDFPLIIDLNRLLKRGP. 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00721 358 Pfam Retinal pigment epithelial membrane protein 117 352 IPR004294 GO:0016702
Seca4g00721 358 PANTHER BETA-CAROTENE DIOXYGENASE 112 352 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00721 Seca-Chr4 12167948 12176282 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00721 - - gmx:100817207 478.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00721 4 12167948 12176282 Seca4g00721 4 12167948 12176282 ECH