Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00710 ATGAGAGCATTGAGAGTGGTGCTTCAGCTTCACACTTTCTCAAATCTGGTTTCCTCCTCCTCCTCCCTCTTTCTTCACAGGAATAATAATTTGCTGAAGAAAAGCTTCTCGTTGGATGGAAATGCAATCTTTACTGATAACTCTCGACTGAGAAAGATATGGACTTCAACTCCTCTTTGTATGGGCAGGCGCTCCAGCAAAATTGCCGGTCGAAAGGGTGCTCAAGATGCCAAGAAAGCAAAACTATACTCAAGGATTGGAAAGGAAGTTGTGTCTGCTGTAAAGAAAGGTGGTCCGAATGTAACATCAAATTCAGTTTTGGCTGCTGTACTTGAAAAAGCAAAGGAGCTTGATGTGCCTAAAGATATTGTTGAGCGCAACATCAAGAGAGCATCTGAGAAGGGACAAGAGGCTTATATTGAGAAAATCTATGAGGTATATGGTTATGGGGGAGTTAGTATGGTAGTTGAGGTATCAACTGATAAGATACATCGTTCTGTGGCAAAGATTAGAGAAGTGGTAAAGGATTATGGAGGAAAGATGGCAGATTCTGGATCTGTGATGTTTAAATTTAGACGTGCTCGGGTGGTGAATATTAAAGTCACCAATGCTGACAAAGATCAACTGCTTACGATTGCTTTAGATGCTGGAGCTGAGGATGTAATTGATCCTCCAAGCTATGAAGATGACACTGAAGAGGATAGGTCAGAAAGGTATTATAAAATTGTAGGTTCTTCAGAGAACTATTCATCTATACTATCGAAGCTACGGGAGGAAGGCATAGATTTTGAGCCTGATAATGGTTCTGAGCTTCTACCAAATACCACAATTGAGGTAGACGATGAGGCTATGGACTTGAACAAGGAACTTATGAACAAATTACTTGAGCTTGATGATGTTGATGCTGTTTATACAGACCAAAAATAG 927 0.4056 MRALRVVLQLHTFSNLVSSSSSLFLHRNNNLLKKSFSLDGNAIFTDNSRLRKIWTSTPLCMGRRSSKIAGRKGAQDAKKAKLYSRIGKEVVSAVKKGGPNVTSNSVLAAVLEKAKELDVPKDIVERNIKRASEKGQEAYIEKIYEVYGYGGVSMVVEVSTDKIHRSVAKIREVVKDYGGKMADSGSVMFKFRRARVVNIKVTNADKDQLLTIALDAGAEDVIDPPSYEDDTEEDRSERYYKIVGSSENYSSILSKLREEGIDFEPDNGSELLPNTTIEVDDEAMDLNKELMNKLLELDDVDAVYTDQK. 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00710 308 FunFam Putative transcriptional regulatory protein 64 138 - -
Seca4g00710 308 FunFam Putative transcriptional regulatory protein 190 275 - -
Seca4g00710 308 Hamap Probable transcriptional regulatory protein YebC [yebC]. 61 308 IPR002876 -
Seca4g00710 308 Pfam Transcriptional regulator 65 306 IPR002876 -
Seca4g00710 308 Gene3D - 190 275 IPR026564 -
Seca4g00710 308 Gene3D - 63 138 IPR017856 -
Seca4g00710 308 SUPERFAMILY YebC-like 61 307 IPR029072 -
Seca4g00710 308 Gene3D - 142 305 IPR026564 -
Seca4g00710 308 PANTHER UNCHARACTERIZED 19 308 IPR002876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00710 Seca-Chr4 11957781 11962948 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00710 - - psat:127084461 477.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00710 4 11957781 11962948 Seca4g00710 4 11957781 11962948 ECH