Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00709 ATGGCTCAGCTCTTCCGGGAACTCTCATTGGGCCAATCTAAGAGAGAGACAACGCCGCCACCGCGTATAATGCCTCCCAAATCACCCGCCGTCGTCGCCGACGACCTTCCCTCTCCGCTCGGCCAAATCTCCGCTAACCTCTCCGATTCCGAACTCGCCCTAACCGCCTACGAGATCTTCGTCGCCGCTTGTCGAACCTCCTCCGGCAAGCCTCTGAGTTTCGTTCCCAACTCGTCCTCCAACAACCACTCCGACTCACCGAGTGTCCAGCGATCCCTCACCTCCACCGCCGCCAGCAAGGTCAAGAAGGCTTTCGGCTTGAAATCTCCCGGTTCGGGTTCCAAGAAGAGCCCTGGCTCCGGTTCGGGTCAGGGAAAGCCGAAGCGGCCATTGACGGTTGGAGAGCTCATGAGGAATCAGATGAGGGTTTCAGAAACCATGGATTCGCGTGTGAGGCGAGCGCTGCTCAGGATTTCTGCTGGCCAGGTTGGAAGACGGATTGAGTCTGTGGTTGTTCCACTTGAGCTATTGCAGCAACTCAAGGCATCGGATTTTACTGATCCACAAGAGTATGAAGAATGGCAGAAGAGGACCCTGAAGGTTCTGGAGGCTGGTCTGATTTTACATCCTTACATACCTCTAGATAAACCCAATTCTGCTGCACAGCGTCTGCGGCAAATTATTCATGCTGCTTTGGATAGGCCTATAGAAACTGGGAGGAATAATGAGTCTATGCAGGTTCTTCGTACTGCTGTCATGTCTCTTGCAAATAGGTCATATGATGGGTCTCTCAATGATTCGTGCCACTGGGCTGATGGGATTCCTCTGAATCTCCGGCTTTATGAAATGCTTCTACAATCCTGCTTTGATGCCAGTGATGAATCATCAATTATTGAGGAATTTGACGAGCTAATGGAACAAATCAAGAAGACCTGGGGAATCCTTGGATTGAACCAGACACTTCATAATCTCTGTTTTACTTGGGTTTTATTTCATCGATTTGTTGCAACTGGCCAGATGGATTTGGAGCTGCTGTCTAATGCTGATGGCCAGCTAGCGGAAGTTGCAAAAGATGCAAAGACAACAAAAGATCCAGAGTATTCCAAAATTCTGAGTTCTACATTGACTTCAATATTGGGATGGGCTGAGAAAAGGCTTCTTGCATATCATGAAACTTTTGATCGTGGAAATGTTGAAACCATGGAGGGCATTGTCTCTTTAGGGGTAGCAGCAGCTAAGATTTTGGTTGAAGATATATCTAATGAGTATCGCCGGAGGAGAAGAACTGAAGTCAATGTGGCCCGGGAAAGAATTGAAACTTACATCAGGTCATCACTACGCACTGCTTTTGCCCAGATAATGGAGAAAGCAGACTCAAGCAGGAGAGCATCAAAGAATCAACCAAATGCCCTCCCTGTTCTTGCCATTCTTGCAAAGGATGTAGGTGCCCTGGCAGTGAATGAAAAGCAAGTCTTCAGTCCAATACTTAAGAGATGGCATCCTTTGGCAGCAGGTCTTGCTGTGGCCACCCTTCATGCATGCTATGGAAACGAATTGAAGCAATTCATTTCAGGTATCACAGAATTGACACCTGATGCTGTTCAGGTATTGAGAGCCGCAGACCAGTTGGAGAAAGACCTTGTGCAGATAGCAGTTGAAGATTCAGTGGACAGTGATGATGGTGGTAAAGCAATAATCCGTGAGATGCCTCCTTATGAGGCTGAAGGTGCAATTGCCAATCTTGTGAAAATATGGATTAAGACTAGATTAGACAGATTGAAAGAATGGGTTGATAGAAATCTTCAGCAAGAGGTTTGGAGTCCTCAATCGAATCAGGAAGGATATGCCCCATCTGCTGTTGAAGTTTTGCGAATTATGAATGAAACTCTGGATGCATTCTTTCAGCTTCCAATACCGATGCATCCTGCATTGCTCCCTGAAGTGATGAATGGCCTTGACAGATGCCTTCAGTACTATGTTATCAAATCAAAATCAGGCTGTGGATCACGAAATACATTTGTTCCAACAATGCCTGCACTGACCAGATGCACTATTGGCTCAAAGTTTCAAGGCTTTGGGAAGAAAAAAGATAAATCTCCAAATTCTCAGAAGAGAAACCCTCAGGTTGCGACAAATGGGGATAGCTCTTTTGGGATACCACAACTCTGTGTTCGCATAAATACTTTGCAATGGATCCTGGGTGAATTTGATGTTCTGGAAAAAAGAATAATTACTCTTTTGCGGAACTCTGAATCTGCTCGTGTAGAAGACTTTTCAAATGGATTAGCAAATAAGTTTGAACTATCTCCAGCTGCCTGTCTTGAAGGAATTCAACAACTCTGTGAGGCTGCCGCATATAGAATCGTCTTCCATGATCTCAGTCAGGTTTTATGGGATGGTTTGTATATTGGGGATCCAACGGCTTCCAGGATTGAGCCATTTCTTCAGGAACTTGAGCGGAACTTAATGTATATTTCAGACAGTGTTCATGAAAGAATTCGAACCCGTATTATTACTGAAATAATGAGAGCTTCCTTTGATGGATTCTTGCTTGTATTGCTTGCTGGAGGCCCCTCTCGTGCTTTTTCCCGGAAGGATTCTCAGATCATAGAGGATGATTTCAAACTTCTTAAGGAGCTGTTTTGGGCAAATGGGGATGGCTTGCCTTCTGAATTAATAGACAAGTTTTCAACTACTGCTAGGTCTGTCCTTCCCCTTTTCAGAACCGACACAGAGAGCCTCATTGAGCAGTTTAGACGCCTAACACTGGAGACATATAAATCATCTGCCAGGTCTAGGCTTCCATTACCTCCAACTTCTGGACAGTGGAGTCCATCTGAACCAAACACATTATTGCGTGTTTTATGCTATAGAAATGATGAATCAGCTTCTAAGTTTCTTAAAAAGACATATGATCTTCCCAAGAAACTTTAA 2934 0.4523 MAQLFRELSLGQSKRETTPPPRIMPPKSPAVVADDLPSPLGQISANLSDSELALTAYEIFVAACRTSSGKPLSFVPNSSSNNHSDSPSVQRSLTSTAASKVKKAFGLKSPGSGSKKSPGSGSGQGKPKRPLTVGELMRNQMRVSETMDSRVRRALLRISAGQVGRRIESVVVPLELLQQLKASDFTDPQEYEEWQKRTLKVLEAGLILHPYIPLDKPNSAAQRLRQIIHAALDRPIETGRNNESMQVLRTAVMSLANRSYDGSLNDSCHWADGIPLNLRLYEMLLQSCFDASDESSIIEEFDELMEQIKKTWGILGLNQTLHNLCFTWVLFHRFVATGQMDLELLSNADGQLAEVAKDAKTTKDPEYSKILSSTLTSILGWAEKRLLAYHETFDRGNVETMEGIVSLGVAAAKILVEDISNEYRRRRRTEVNVARERIETYIRSSLRTAFAQIMEKADSSRRASKNQPNALPVLAILAKDVGALAVNEKQVFSPILKRWHPLAAGLAVATLHACYGNELKQFISGITELTPDAVQVLRAADQLEKDLVQIAVEDSVDSDDGGKAIIREMPPYEAEGAIANLVKIWIKTRLDRLKEWVDRNLQQEVWSPQSNQEGYAPSAVEVLRIMNETLDAFFQLPIPMHPALLPEVMNGLDRCLQYYVIKSKSGCGSRNTFVPTMPALTRCTIGSKFQGFGKKKDKSPNSQKRNPQVATNGDSSFGIPQLCVRINTLQWILGEFDVLEKRIITLLRNSESARVEDFSNGLANKFELSPAACLEGIQQLCEAAAYRIVFHDLSQVLWDGLYIGDPTASRIEPFLQELERNLMYISDSVHERIRTRIITEIMRASFDGFLLVLLAGGPSRAFSRKDSQIIEDDFKLLKELFWANGDGLPSELIDKFSTTARSVLPLFRTDTESLIEQFRRLTLETYKSSARSRLPLPPTSGQWSPSEPNTLLRVLCYRNDESASKFLKKTYDLPKKL. 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00709 977 ProSiteProfiles Munc13-homology domain 1 (MHD1) profile. 534 677 IPR014770 -
Seca4g00709 977 PANTHER PROTEIN UNC-13 HOMOLOG 31 975 IPR008528 -
Seca4g00709 977 ProSiteProfiles Munc13-homology domain 2 (MHD2) profile. 808 918 IPR014772 -
Seca4g00709 977 MobiDBLite consensus disorder prediction 691 713 - -
Seca4g00709 977 MobiDBLite consensus disorder prediction 75 99 - -
Seca4g00709 977 MobiDBLite consensus disorder prediction 1 28 - -
Seca4g00709 977 MobiDBLite consensus disorder prediction 75 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00709 Seca-Chr4 11906204 11910616 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00709 - - gmx:100814675 1706.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00709 4 11906204 11910616 Seca4g00709 4 11906204 11910616 ECH