Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00704 ATGCAAAGTGCTTCCTTTTTGGCCCAAATGGTTTCATCAGTCTCTCTTATAATCATTTACCTCCCTACCAGAAAAGGGGTACTCCAAAATTCGTATCTTCAACAACAACACAAGCAAAAGGAAGAATGGTTAGCAGGTAGTTTCAAGCCAGAGAACTTCGTTCCAGGTCTTGTCATAGGTTTCATTTTTGGGTTGTTGTTAGATTTATCTAAGCCTCATAGAAATAACTTGTCCAAGAAAGTTTTCTCATCTAGCAAGGTTCAACAGCAACTCTCAGTCTCAAGTAATGGTGATCAAGAGCTTAAAATGGTTCTGGTTGTTAGGCAAGACCTAAAGATGAAATCTGGAAAGATTGCATCCCAATGTGCTCGTAAGTTATGA 381 0.3885 MQSASFLAQMVSSVSLIIIYLPTRKGVLQNSYLQQQHKQKEEWLAGSFKPENFVPGLVIGFIFGLLLDLSKPHRNNLSKKVFSSSKVQQQLSVSSNGDQELKMVLVVRQDLKMKSGKIASQCARKL. 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00704 126 Pfam Peptidyl-tRNA hydrolase PTH2 101 124 IPR002833 GO:0004045
Seca4g00704 126 PANTHER PEPTIDYL-TRNA HYDROLASE 2 34 123 IPR002833 GO:0004045
Seca4g00704 126 SUPERFAMILY Peptidyl-tRNA hydrolase II 100 123 IPR023476 -
Seca4g00704 126 Gene3D Bit1 96 125 IPR023476 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00704 Seca-Chr4 11829243 11830856 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00704 K04794 - gmx:121174779 132.109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00704 4 11829243 11830856 Seca4g00704 4 11829243 11830856 ECH