Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00689 ATGCCTGAGCTGCGTACCCGAGCACGCAGAAACCGCCGTGTAGATAACGATAACTTGAATCCGATTGCCCAGCCTCACTCACCGGCGGCTGCCGGAGCTCACCTGAGGAAGAGAACTGCTGCTGCTTTTCAGACCAGGAGGAATCGGAGGCAGAAGAACGCGATCGCTGCCGATGAAATCGGTGATATTGTGAACAACGACGACGCGGGAGCCGTTCGTGATACCAGAGCCAAGGAATTGAAAGAGGAACAAGTAGAGAAGAAGAAGAAGCCGCCGCTTGGGGTTTTTGGGGTGGAAGCCATGGATGAGTACGATAGTGGTGGCCGCAGCGCGGATAAGGCTCCAGGCGCCGATGACGAGGGCACCACACCTCCCCTTCCAGAGAAGGTCCAGGTTGGTGGTTCCCCGTTATACAAAATCGATAGAAAACTTGGTAAGGGAGGATTTGGACAAGTCTATGTTGGTCGGCGTGTAGGAGCTGGTTCCGGTGCAGTTGAGGTAGCCTTAAAATTTGAGCATAGAAGCAGCAAGGGGTGCAATTATGGACCTCCATATGAGTGGCAGGTTTACAATGCTTTAGGTGGTAGTCATGGTGTTCCACGAGTTCATTACAAGGGGCGGCAAGCTGACTTCTATATCATGGTCATGGATATGCTTGGTCCCAGTCTATGGGATGTTTGGAATAACAACTCACAAACGTCAGTATCTCTCTGA 714 0.5196 MPELRTRARRNRRVDNDNLNPIAQPHSPAAAGAHLRKRTAAAFQTRRNRRQKNAIAADEIGDIVNNDDAGAVRDTRAKELKEEQVEKKKKPPLGVFGVEAMDEYDSGGRSADKAPGADDEGTTPPLPEKVQVGGSPLYKIDRKLGKGGFGQVYVGRRVGAGSGAVEVALKFEHRSSKGCNYGPPYEWQVYNALGGSHGVPRVHYKGRQADFYIMVMDMLGPSLWDVWNNNSQTSVSL. 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00689 237 MobiDBLite consensus disorder prediction 104 133 - -
Seca4g00689 237 ProSitePatterns Protein kinases ATP-binding region signature. 144 170 IPR017441 GO:0005524
Seca4g00689 237 ProSiteProfiles Protein kinase domain profile. 138 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca4g00689 237 PANTHER CASEIN KINASE-RELATED 135 232 - -
Seca4g00689 237 MobiDBLite consensus disorder prediction 1 54 - -
Seca4g00689 237 Gene3D Phosphorylase Kinase; domain 1 129 218 - -
Seca4g00689 237 MobiDBLite consensus disorder prediction 1 16 - -
Seca4g00689 237 SUPERFAMILY Protein kinase-like (PK-like) 138 230 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00689 Seca-Chr4 11530284 11532165 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00689 - - gmx:100779382 303.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00689 4 11530284 11532165 Seca4g00689 4 11530284 11532165 ECH