Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00687 ATGGAGCGCTTGCGTCCTCGCAACAGAGCCGTTTTTTCTGGCTTTACAAATGCTGAGATTGAAAAAATGGAGAAATTGTTAAGGGAATCACAAGGACGATCATTTGACCGAGAATTCTACCAAAAAATCGCTGGAAGTTTCAACCGTTCCTCTGGTCGTGCTGGGAAACCTGTCATAAAATGGACTGAGATACAAAATTGGTTTGAGACCAAGCTCCAAGACTTACCACATGTCCCTGAAAATGAGTTGACATTTCCTAAATGCAAGGAAGGAGAAATGATCCGAGACCCATCAGAGTTGGAATTTGAAGCAAGGTCATCAAAAGATGGAGCATGGTATGATGTTGACACTTTTCTAGCTCACAGGCTTCTTAGCACAGGGGAAGCTGAAGTCCATGTCAGATTTGTTGGATTTGGAGCTGAGGAAGATGAGTGGGTCAATGTAAAAAATTCAGTCCGAGAACGCTCTGTACCTTTTGAAAACACAGAGTGTTCCAACCTCAAAGTTGGAGACCCTGTCCTATGCTTCCAGGAAAGGAGAGACCAAGCAATTTACTATGACGCTCACATTGTAGAGATCCAAAGGAGAATGCATGATATCAGAGGCTGCAGGTGTCTCATCTTAATTCGGTATGATCATGACAACAGTGAGGAAAAAGTTCACTTGAGGAGACTTTGCCGCAGAACAAGATCTTAG 696 0.4325 MERLRPRNRAVFSGFTNAEIEKMEKLLRESQGRSFDREFYQKIAGSFNRSSGRAGKPVIKWTEIQNWFETKLQDLPHVPENELTFPKCKEGEMIRDPSELEFEARSSKDGAWYDVDTFLAHRLLSTGEAEVHVRFVGFGAEEDEWVNVKNSVRERSVPFENTECSNLKVGDPVLCFQERRDQAIYYDAHIVEIQRRMHDIRGCRCLILIRYDHDNSEEKVHLRRLCRRTRS. 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00687 231 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 10 229 IPR039276 -
Seca4g00687 231 Gene3D - 159 230 - -
Seca4g00687 231 Pfam SAWADEE domain 99 226 IPR032001 GO:0003682
Seca4g00687 231 Gene3D - 97 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00687 Seca-Chr4 11518878 11523633 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00687 - - gmx:100817690 407.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00687 4 11518878 11523633 Seca4g00687 4 11518878 11523633 ECH