Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00663 ATGTTCTCAATCGCAGCTATCAATGATACCGACTCTAAAAGTCAGTGGGAACCACTAGCTCCTACTAAAGAAGCCCAGGAATTTCATCTTTCTCAAACTTATCATGAAGGACTTCTCAAGTTACAAGCAAAAGAATATGACAAGGCTCGCGAGCTCCTAGAATCTGCCCTTAAAGATCCTCTTATTGCCAATGCTCAGGTGGATAGCAGTGCCGGTGATGGTCATCTATTGCAACTCAGATTTTTGGCATTGAAAAACCTTGCCACTGTTTTTCTTCAGCAAGGTTCTACACATTATGAAAATGCTCTGCACTGTTATCTTCAAGCCGTGGAGATTGATTCTAAAGATTCTGTTGTCTGGAACAAGCTGGGAACATTGTCATGTTCAATGGGTTTACTAAGTATTTCACGTTGGGCATTTGAGCAAGGCCTCTTGTGTAGCCCTAATAACTGGAATTGCATGGAAAAGCTTTTGGAAGTTCTTATTGCAATTGGTGATGAGGTTGCTTGCCTCTCAGTTGCTGAGTTGATATTGAGGCACTGGCCATCACATTCTCGTGCTTTGCATGTTAGAAATACCATAGAAGAATCAGAGCCATTGCCATTTGCTCCTAGAGGCATAGACAAATTGGAACCTAAACATGTGCGGCTCAAATTTCCTGACAAGAGAAAAGCTACTAATGAGAGTCTAGATGGGGATGTTGCATTCAAAAAGCTGAAACAAAATAAGGACCTGCACCTGAAAGAGGTTTCGTGGGTGGCTCTTGCTGATGCACTGCTGGAAATCTTATTGCCATTGCATCTGCCAAGTTCTGAGATGGATCCTGAAAAATCACACTATTCTCCAGACATTAGGCTAAGCATAAACTTACCTTGCAATTCAGATGCTGTTATGAACACTATGGAAGTGAAAGGATCTAATGTTGAAAGCAGTGCTTTTGGTGATGGTAATATAGAACGATCAAGTGTTTTTAAAGAGAAAGAAGTAAATATCCAAGGAGAACAACCACATGAAAGGCGAAGTTCTCGGCTTGAAAGGCTCCGGAGTCGTAAACCAGGGAAAGAAGAATCAGATTCTTCTTGTGGAAAGGACCGTGCCAAGGTCGTCATTCAATATCTAGAATCTTTTATTGCTGGTGGACTGGGTGGTCGAGATATTATTGATAGTGATACTACAACACTATCCTATTTAGGAAATTCTGAATATAATAATGTTTCCTCATTTTTAAGAGAAACTTCAAACAATCATGGTGTTTACCATATGGGACACCTGCTTTTAGAAGAGGTTGCAAAACAAGGCCTCGCGCATCAGGATGCTTTTGTCAAATTTCTGGAGTTGGAAAAGTTAACAAGGCACTGGGGAAAGGAGAGAACTGCTGAATGTAATATTTTTCTTGCTGAGCTGTATTATGACTTTGGGTTATGCTCCTCCGCTGGTTCTAAACAAATAGAATTTATGTCAGAGACATCTTATCATCTCGGTAAGATCATTGAGTCTGTAGCTCTAGATTATCCTTTTACCTTGACAAATGCCTTGAGTGAAGGTTGTTTTTCGATTGGTGGTTTACAAGAGACTAGTGGAACATCAATAGATACCTCCACTGAGAGCAATTCCAATTTAGATAGCTCACTTCTGGTAAAAAACAGTTCATTCTGGGCTCGATTTTTCTGGCTAAGTGGGAGATTGTCTAATTTTGATGGCAACAGGGCAAAAGCCTGTGAAGAACTTTGTATTGCTTTGTCGCTTTTGGGAAAGAGGGAAAATATGGAACATTCTCCAGGTTCAGTCCCTCGTCCACATTGTAAGGCTGTAAAAGAGCTAAACATTGATAGAGTGCTTTATGAAATCAATATATTAAAGGTCAATTTCTCGATGGAAAAGTCTGTCATTAAGATGATGGAACAAGAAAAGTATTTTGAGTGTATAACCCTGCTTTCCCCTCTTATGTTCTCCACTCGGGATGTCTACATCGATTCATTTTCTTTAGCCATGGCAGATAAAAAAGATGAAAAGATAACTTCTACTGAACTCAGGGCTTTAGATGTTCTAATAGAAGCATGTCAGAAGACAACACCGATGGATGTAGAAATGTATTTCAATTGTCATTACAGAAAGCTGAAAATACTTATGGCTATGATGGGGTTGAATAAATGTATTACACCCTTTAAATTTTCTGATCAAACACTTGGTTCTAATTTTGATATTGATTCAAATGAAAGTTCTAGCAATCACTGTTGTCACTTGGTTGCTGAGGAAGTGAAGGCACTCTCTGACTGTATCTCACAAGTGAAGAAAGTTATTGATCATCATGGAGATTCTGATGGCCTTACTGTTCCAACAAGCAGCATTTGTCAAATGCAATCTCTACTGTTGTTAATCATGAGCTATGTTGCTAATATTCTTGTCTGTAACAAAGCCTCTGCACAAGTAATTTCTGATCAAGTGGAAAGCAGCTGTTTTGTTGATGCAGCCATTGTTTTCTGCAAACTCCAGCATCTTAGCCCAACCACACCTATCAAAACTCAAGTTGATTTAATTGTTGCAATGCATGACTTGCTTGCTGAATATGGGCTTTGCTGTGTGGGTGAAGGTGGCAAAGGTGAAGAAGGAACATTTCTTAGATTTGCAATAAAGCATCTCTTGGCCTTGGATATGAAGTTTAAATCCAGCTTTAACCTTCTAAATAAAGAATCAATGCAGTGCGAAGAAGTGTCCAAAAACAGACTTGTCAATGTATCTGTTGAAGATTCAAAATCAGATACATTAGATATCCAGATGGATGGGACTAAAATTGATGAAGTTAATCCTGTGAAAAGGGATGTTTCTGAAGGAATAATTTCCAAAGGCATTTCATCGTGCAAAGTTCATGATAAAGACAGTAAGGAAGCAGAGTGTGGAAATCATGGAGGTGCTGGGACTGATAATCAGTTAGTTAAGGGTGAAAATTCATGCAATCAATTTTTTGATTGTGGAAATGAACTTTCTGAAGATGAAAGGGAGGAACTTGAGTCTAAAATTGACAGTGCCTTAGATCAGTGCTTTTTCTGTTTATATGGATTAAACCTAAGATCTGATTCATCTTATGAAGACGATCCAGTGATGCACAAAAATACAAGCCGGGGAGATTATCAGACCAAGGAACAGTGTGCCGATGTTTTCAAGTATGTTCTTCCCTATGCAAAGGGATCTTCTGTGAGTACTAATTGTATGTACCAGAGGACTGGACTGGTCAAACTTCGTAGAGTTTTAAGAGCTATTCGGAAGCACTTTTTGCAGCCACCAGAGGACCTCTTGGCAGGAAACCCTATAGATAAGTTCCTAGATGATCTGAATCTATGTGAAGATAAACTCTCAGAGGAGGCTGGGTCTGATGGATTTCTTGAAACTATAACTAAGATCATGTTTCCTGATGTGGGAGGCCTTGCACAATATAACACAACACTATTGAGGAGGTCTGAGCCATATTTGGAGGTTTACTGTAACTTGTATTATTTCTTAGCTCTGTCCGAGGAAATGAGTGCAACAGATAAATGGCCTGGATTTGTGCTGACCAAGGAAGGGGATGAATTTGTTGAACAAAATGCAAAGCTCTTCAAATATGATCTTATGTATAATCCTCTGCGCTTTGACAGCTGGCAACGACTTGGAAATATTTATGATGAGGAAGTAGATTTGTTGCTTAATGATGGTAGCAAGCACATTAATGTAGTAGGATGGAGGAAGACTCCTACTTTATCTGAGAGAGTGGAAACAAGCCGAAGGAGGAGTAGACGGTGCCTACTAATGAGTTTAGCTTTGGCAAAGACATCTGCTCAGCAGTGTGAGATACACGAGTTATTGGCCTTGGTATATTACGACAGCCTTCAAAATGTAGTCCCTTTTTATGATCAGAGATCTGTTTTACCCTTAAAGGATGCAGCGTGGATGATGTTTTGTGAGAACTCAATGAAACATTTTAAGAAAGCCTTCGCACTTAAGCAAGACTGGTTGCATGCATTTTACTTGGGTAAACTCAGTGAAAAGCTTGGATATTCACATGAAATTGCTTTATCGTATTACAATAAAGCTATTGCTTTGAACATATCAGCTGTTGATCCTGTCTATAGGATGCATGCCTCACGCTTGAAGCTATTATTTAAGTGCGGAAAACAGAATTTGGAAATTTTGAAGGTTATTTCAGCAAACTGCTATAATCAATCTGTAAAAGAAGCTGTCACAAGTATCCTTGGTGGTATGGATAGCTCATTTTTAAATACAAAGGAGGGATGTATTCATTCCAATTCTGTGGAAACAAAGCATGAAGGGTTGCTCAAATTGGATACGGTGTGGTCCATGCTTTACAATGATTGCCTTTCTGCACTTGAAACTTGTGTTGAGGGGGATCTCAAACATTTCCATAAGGCCAGATACATGCTGGCTCAAGGGCTATATAAAAGGGGTGAAAGTGGTGATATAGAGAAGGCAAAAGATCAACTATCTTTCTGCTTCAAATCTTCCCGCTCATCCTTTACAATAAATATGTGGGAAATTGATAGCATGGTGAAAAAAGGAAGGCGCAAGACACCAGGTTCTGCTGGGAACAAAAAAGCCCTTGAGGTTAACTTACCAGAAAGTTCTCGGAAATTCATTACTTGCATTCGAAAGTATGTGCTGTTTTATCTCAAACTATTGGAGGAGACTGGAGATAGGTGTATTCTTGAACGTGCATATGTTTCTCTTCGGGGAGATAAGCGGTTTTCATTATGTATTGAAGATCTTGTACCAGTGGCCATTGGAAGATATTTAAAGGCACTGATTTCAACGATGTCCCATTCTCAGACTACTGCATCTGGTTCTGTCAGCAGTTCTGACAATGTGCTGGAGAGAATGTTTGCTTTGTTCATGGAGCAAGGTAGTTTATGGCCAGAAATATGCAGCTTGCCTGAAATTGCGAGCCCAGATACATCAGAGAGTATCATATATAGATATCTTCATGAACACGTCGTATTATTGGAGAAAAATGGAAAGCTGGAGACTCTTGAAGCAATAAATGAGAAGATTCGGAAACGTTTTAAGAATCCAAAGTTCTCGAATAGCAGTTGTGCAGAAGTTTGCAGGCATGCTTCTGTTGCTTGGTGCCGATCTCTTATATATAATTTGGCACAAATCACCCCTTCATCATGTGGATTCTCAAATGGGATTCAGGTCCCTAATTTGACTGATGGTGGGATGGATAATAGCCAGTTGCTCTGTATTGATTTGCAGCCACATGAATTATGGAGTACAGCTTTTGAAGATCCAACTCATTTAGAAAAGATTGAAACAAAATGGAGTGTCATTTTATCAAAAATAAAGAATATAATAATCAAGAAAGCTTCTGATGAAAATTTGGAAACTGCAAACGCTTTGCTCAAAGCCTGTTATAATTTTTACCGGGAGAGTTCTTCTGTAGTGCTTACCTCTGGCCTCAAGTTTTATTTGATTCCATCTCAATTAGTAACAGAGACACCATTCAACCCAAGTATGATTGGGATTGAAGCACTTGATCTGAGCATCCCAAGGAAGCTTCTCTTGTGGGCCTATGCGCTATTGCATGGACGATGTGCAAATATCTCAGTTGTTGTAAAGCATTGTGAAGAAATTTCAAAGTCAAAGATGAAAAGAGGAAGTGGAACATCACCTGCGTTTTCAAACACACCTGCTGCCGCCCCTACTCTTCCAGGTAGCGGTAAAAATGGACAAAATTCTGGCGGAGGCACTGACGTTGATTCTACCCATGTCACAACAGTGGGTTGCGGTTCATTTTCCGGCAATACTACTAATTTTATGAATTCATTGTCCTCCGATGAGATTCAAAAGAATCTCTTTGCTTCTCCCCAGTTGCATCAATGTACCACCAATGATGCAGAAAGAAGCAGTTTGACGGCACATGAAGGGGATGCAAAAGGTGATTGA 5934 0.3957 MFSIAAINDTDSKSQWEPLAPTKEAQEFHLSQTYHEGLLKLQAKEYDKARELLESALKDPLIANAQVDSSAGDGHLLQLRFLALKNLATVFLQQGSTHYENALHCYLQAVEIDSKDSVVWNKLGTLSCSMGLLSISRWAFEQGLLCSPNNWNCMEKLLEVLIAIGDEVACLSVAELILRHWPSHSRALHVRNTIEESEPLPFAPRGIDKLEPKHVRLKFPDKRKATNESLDGDVAFKKLKQNKDLHLKEVSWVALADALLEILLPLHLPSSEMDPEKSHYSPDIRLSINLPCNSDAVMNTMEVKGSNVESSAFGDGNIERSSVFKEKEVNIQGEQPHERRSSRLERLRSRKPGKEESDSSCGKDRAKVVIQYLESFIAGGLGGRDIIDSDTTTLSYLGNSEYNNVSSFLRETSNNHGVYHMGHLLLEEVAKQGLAHQDAFVKFLELEKLTRHWGKERTAECNIFLAELYYDFGLCSSAGSKQIEFMSETSYHLGKIIESVALDYPFTLTNALSEGCFSIGGLQETSGTSIDTSTESNSNLDSSLLVKNSSFWARFFWLSGRLSNFDGNRAKACEELCIALSLLGKRENMEHSPGSVPRPHCKAVKELNIDRVLYEINILKVNFSMEKSVIKMMEQEKYFECITLLSPLMFSTRDVYIDSFSLAMADKKDEKITSTELRALDVLIEACQKTTPMDVEMYFNCHYRKLKILMAMMGLNKCITPFKFSDQTLGSNFDIDSNESSSNHCCHLVAEEVKALSDCISQVKKVIDHHGDSDGLTVPTSSICQMQSLLLLIMSYVANILVCNKASAQVISDQVESSCFVDAAIVFCKLQHLSPTTPIKTQVDLIVAMHDLLAEYGLCCVGEGGKGEEGTFLRFAIKHLLALDMKFKSSFNLLNKESMQCEEVSKNRLVNVSVEDSKSDTLDIQMDGTKIDEVNPVKRDVSEGIISKGISSCKVHDKDSKEAECGNHGGAGTDNQLVKGENSCNQFFDCGNELSEDEREELESKIDSALDQCFFCLYGLNLRSDSSYEDDPVMHKNTSRGDYQTKEQCADVFKYVLPYAKGSSVSTNCMYQRTGLVKLRRVLRAIRKHFLQPPEDLLAGNPIDKFLDDLNLCEDKLSEEAGSDGFLETITKIMFPDVGGLAQYNTTLLRRSEPYLEVYCNLYYFLALSEEMSATDKWPGFVLTKEGDEFVEQNAKLFKYDLMYNPLRFDSWQRLGNIYDEEVDLLLNDGSKHINVVGWRKTPTLSERVETSRRRSRRCLLMSLALAKTSAQQCEIHELLALVYYDSLQNVVPFYDQRSVLPLKDAAWMMFCENSMKHFKKAFALKQDWLHAFYLGKLSEKLGYSHEIALSYYNKAIALNISAVDPVYRMHASRLKLLFKCGKQNLEILKVISANCYNQSVKEAVTSILGGMDSSFLNTKEGCIHSNSVETKHEGLLKLDTVWSMLYNDCLSALETCVEGDLKHFHKARYMLAQGLYKRGESGDIEKAKDQLSFCFKSSRSSFTINMWEIDSMVKKGRRKTPGSAGNKKALEVNLPESSRKFITCIRKYVLFYLKLLEETGDRCILERAYVSLRGDKRFSLCIEDLVPVAIGRYLKALISTMSHSQTTASGSVSSSDNVLERMFALFMEQGSLWPEICSLPEIASPDTSESIIYRYLHEHVVLLEKNGKLETLEAINEKIRKRFKNPKFSNSSCAEVCRHASVAWCRSLIYNLAQITPSSCGFSNGIQVPNLTDGGMDNSQLLCIDLQPHELWSTAFEDPTHLEKIETKWSVILSKIKNIIIKKASDENLETANALLKACYNFYRESSSVVLTSGLKFYLIPSQLVTETPFNPSMIGIEALDLSIPRKLLLWAYALLHGRCANISVVVKHCEEISKSKMKRGSGTSPAFSNTPAAAPTLPGSGKNGQNSGGGTDVDSTHVTTVGCGSFSGNTTNFMNSLSSDEIQKNLFASPQLHQCTTNDAERSSLTAHEGDAKGD. 1978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00663 1977 Coils Coil 992 1012 - -
Seca4g00663 1977 PANTHER CALCINEURIN-BINDING PROTEIN CABIN 1-RELATED 1 1966 IPR033053 GO:0006325
Seca4g00663 1977 MobiDBLite consensus disorder prediction 1879 1916 - -
Seca4g00663 1977 SUPERFAMILY TPR-like 33 169 IPR011990 GO:0005515
Seca4g00663 1977 MobiDBLite consensus disorder prediction 328 362 - -
Seca4g00663 1977 Coils Coil 39 59 - -
Seca4g00663 1977 Gene3D Tetratricopeptide repeat domain 21 199 IPR011990 GO:0005515
Seca4g00663 1977 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 13 198 - -
Seca4g00663 1977 Coils Coil 1663 1683 - -
Seca4g00663 1977 MobiDBLite consensus disorder prediction 1880 1916 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00663 Seca-Chr4 11059929 11078948 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00663 K17613 - gmx:100783154 3288.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00663 4 11059929 11078948 Seca4g00663 4 11059929 11078948 ECH