Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00652 ATGGATCCTTGCCCTTTCGTGCGCCTCACTGTGGGTAACCTCGCCCTCAAGATTCCCGTTGCTTCCAAGCCTGCTCGCTCCGTCGTCCATCCTTCTTCCTCTCCATGCTTCTGCAAGATCAAGCTCAACAGCTTCCCTCTGCAAAACGCCGTCGTTCCCTTCATCCCTCCCGACAGCAACTTCCCTGACTCACAAGTTCAGCCCATCGCCGCTACCTTCCACCTCAGCAAGTCTGATCTCGACAGGCTCGCCGGAAAGTCCATTTTCGCCAAGAAGCTCTGCCTGAAAATCTCGATCTACACCGGCCGGAGAGGCACCACTTGCGGCGTCAATTCCGGGAGGCTGCTGGGTAAAGTATCCGTCCCTTTGGATCTGGCGGGAACGATAGCCAAGGCTACGGTTTTCCACAATGGCTGGATTACGGTGGGAAAGGAAGCTAAAGGCTCTTCTGCACAGTTCCATCTGAATGTGAAGGCTGAACCTGACCCGAGATTCGTGTTCCAGTTCGACGGCGAACCCGAGTGTAGCCCCCAAGTTTTCCAGATCCAAGGCAACATTTCCCAACCCGTCTTCACCTGCAAGTTCAGTTTCAGAAACACCGGTGACCGGAATCAGCGTTCTAGATCGTTACAGTCAGAAGCGGGTAGTTCTAGAAGCTGGTTAAGCTCTTTCGGAAGCGAGCGTGAGCGCCCTGGGAAGGAACGCAAGGGATGGTCCATAACGGTTCATGATCTTTCTGGCTCACCGGTTGCAGCCGCTTCCATGGTCACGCCTTTCGTCGCTTCGCCCGGTTCGGACCGGGTTAGCTGCTCCAACCCTGGTTCTTGGCTTATTCTTCGCCCGGGCGACGGTACCTGGAAGCCATGGGGGAGGCTCGAAGCATGGCGCGAGCGCGGAGGTTCCGATGGACTCGGCTACCGTTTCGAGCTCATACCAGACACTAACGGCGGCATGAGTGCCGCCGGCATAGTCCTTGCGGAGTCCACGCTGAGCACTAACAAAGGAGGAAAGTTCGTGATCGATTTGAGCAGCCGCTGCGGCAACGGCGGTGTTGGATCTAACGGCCGTGCCACGCCGGGGAGTGCGACGTCTCCGGTGTGCAGCCCCAAGGGCAGCGGTGATTATGGTTACGGTCTTTGGCCTTATTGCGTGTACAGAGGGTTTGTGATGTCGGCGAGTGTGGAAGGTGAGGGAAGGTGCAGCAAGCCTACGGTGGAGGTGAGCGTGCCGCACGTGAATTGCACGGAGGATGCGGCGGCGTTTGTGGCGTTAGCCGCTGCCGTTGATCTTAGCGTGGATGCTTGTAGGCTCTTCTCTCAACGGTTGAGGAAGGAGCTCTGCCAGCAGTTGGAATTACTTGGCTGA 1365 0.5714 MDPCPFVRLTVGNLALKIPVASKPARSVVHPSSSPCFCKIKLNSFPLQNAVVPFIPPDSNFPDSQVQPIAATFHLSKSDLDRLAGKSIFAKKLCLKISIYTGRRGTTCGVNSGRLLGKVSVPLDLAGTIAKATVFHNGWITVGKEAKGSSAQFHLNVKAEPDPRFVFQFDGEPECSPQVFQIQGNISQPVFTCKFSFRNTGDRNQRSRSLQSEAGSSRSWLSSFGSERERPGKERKGWSITVHDLSGSPVAAASMVTPFVASPGSDRVSCSNPGSWLILRPGDGTWKPWGRLEAWRERGGSDGLGYRFELIPDTNGGMSAAGIVLAESTLSTNKGGKFVIDLSSRCGNGGVGSNGRATPGSATSPVCSPKGSGDYGYGLWPYCVYRGFVMSASVEGEGRCSKPTVEVSVPHVNCTEDAAAFVALAAAVDLSVDACRLFSQRLRKELCQQLELLG. 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00652 454 Pfam Protein of unknown function (DUF1005) 1 447 IPR010410 -
Seca4g00652 454 PANTHER OS08G0163500 PROTEIN 1 449 IPR010410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00652 Seca-Chr4 10930266 10932673 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00652 - - gmx:100805268 852.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00652 4 10930266 10932673 Seca4g00652 4 10930266 10932673 ECH