Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00649 ATGAGGTTGAGGGAGGACGTACCTTGTAGGAACGGTGAAGGTGTTGAGGAAGAGGAAATAGTGGAGGAGGTAGCTATGGCTCAAAATCAATGGTGTCCGCTTGTGAATGCTGGATTTTCTTCGCCAAATAGAGTGGTTGTGGTTGGATATGCTCTCACTTCTAAAAAGATTAAGAGCTTTTTGCAGCCAAAGCTTGAAGGTTTAGCTAGGAACAAGGGGATACTATTTGTAGCTATTGACCAGAATAGGCCTCTTTCAGATCAAGGTCCTTTTGATATCGTGTTGCATAAGTTATCAGGGAAAGAGTGGCGCCAGGTTCTTGAGGATTACAGGCAATCGCACCCAGAAGTTACTGTTCTAGATCCTCCGGATGCCATACAACATTTACGCAATCGCCAGTACATGCTTCAGGCTGTTGCTGATATGAACCTTTCTGATTCCTATGGCAAAGTTGGTGTTCCTCGGCAATTAGTTATCAAGAGAGATGCATCAGCCATCCCAGAGTTGGTCAACAGAGCTGGCTTGACTTTACCCCTTGTTGCAAAGCCACTGGTTGCTGATGGAAGTGCAAAGTCACATGAATTGTCCCTTGCTTATGAGCAGTACTCCCTTCAGAAACTTGAACCTCCTCTTGTTCTTCAGGAGTTTGTCAACCATGGAGGTGTTCTCTTCAAGGTTTATATAGTTGGTGATGCTATAAAGGTAGTCAGACGGTTTTCATTGCCTGATGTTAGCAAGTGGGAGCTCTCCAATGATGCTGGCTTATATAATTTTCCAAGGGTTTCTTGTGCTGCAGCTTCTGCAGATGATGCAGATCTGGACCCCACAGTTGCTGAGCTTCCTCCAAGACCTTTGCTTGAGAAACTGGCCAAGGAACTTAGATGGCGATTGGGTCTTCGTCTATTCAACTTGGATATTATCCGCGAGTATGGAACAAGGGATCACTTTTACGTCATTGACATTAACTACTTCCCAGGATATGGCAAAATGCCAGAATATGAACACATATTTACGGACTTCCTGTTGAGCCTGGGGCAGGGGAACTACAAGAAAAAATCTGGCTAA 1065 0.4469 MRLREDVPCRNGEGVEEEEIVEEVAMAQNQWCPLVNAGFSSPNRVVVVGYALTSKKIKSFLQPKLEGLARNKGILFVAIDQNRPLSDQGPFDIVLHKLSGKEWRQVLEDYRQSHPEVTVLDPPDAIQHLRNRQYMLQAVADMNLSDSYGKVGVPRQLVIKRDASAIPELVNRAGLTLPLVAKPLVADGSAKSHELSLAYEQYSLQKLEPPLVLQEFVNHGGVLFKVYIVGDAIKVVRRFSLPDVSKWELSNDAGLYNFPRVSCAAASADDADLDPTVAELPPRPLLEKLAKELRWRLGLRLFNLDIIREYGTRDHFYVIDINYFPGYGKMPEYEHIFTDFLLSLGQGNYKKKSG. 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00649 354 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain 47 126 IPR041429 -
Seca4g00649 354 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 122 328 - -
Seca4g00649 354 PIRSF ITPK 16 354 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Seca4g00649 354 FunFam Inositol-tetrakisphosphate 1-kinase 4 122 326 - -
Seca4g00649 354 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain 146 342 IPR040464 -
Seca4g00649 354 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 43 348 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Seca4g00649 354 Gene3D - 122 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00649 Seca-Chr4 10901402 10907658 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00649 K00913 - gmx:100776901 645.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00649 4 10901402 10907658 Seca4g00649 4 10901402 10907658 ECH