Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00636 ATGGCCGAAATCTCTCTTCCTCCGGGCTCTTATTTTCTCGGATTTGATAGCTCAACCCAGTCGTTAAAGGCAACTGTTTTGAACTCCAACCTCAACATCGTTGCGTCTGAGCTGGTTCACTTTGATTCTGATTTGCCCCATTACAAGACTAAGGATGGGGTATACAGAGACCCCTCTGGCAATGGCAGAATTGTTTCACCCACATTGATGTGGGTGGAAGCTCTTGACCTTATGTTTCAAAAGCTCTCCAAATCAAAATTGGATTTTTCCAAGATTGCTGCTGTTTCGGGTAGTGGACAGCAGCATGGTAGTGTGTATTGGAAGACTGGTAGTTCTCAGAGATTGTCATCATTGGATCCTAAGAAACCATTGCTGGAACAGTTTGAGAATGCTTTTTCCTTAAAGGAATCCCCAATATGGATGGACTGTAGCACCACTGCTGAGTGTAGGGCAATAGAGAAAGCTTGTGGGGGAGCTATGGAGTTGGCTAGAGTGACAGGATCTCGTGCATATGAAAGATATACTGGCCCCCAAATTAAGAAACTATATGATAACCAGCCAGAAATTTATAATAACACTGAAAGGATCTCACTTGTTAGCTCCTTCATGGCATCCCTTTTTCTTGGTGCTTATGCTGCTATTGATCATACTGATGGTGCAGGCATGAATTTAATGGACATAAATGAAAGGGCCTGGTCTAAAGTAGCACTTGAGGCAACTGCCCCTGGTTTGGAGTCAAAACTTGGAAACCTGGCCCCTGCATATGCTGTTGCTGGAAATATTGCTCCATATTTTGTAGAGAGGTACCACTTTAACAAGGATTGCTTGGTTGTTCAATGGTCAGGAGACAATCCCAACAGTTTGGCAGGTTTGACCCTAAATATTCCAGGAGATCTTGCCATCAGCCTTGGCACTAGTGACACTGTATTTATGATCACTAAAGATCCAAATCCAGGATTAGAGGGACATGTCTTCCCTAATCCAGTGGATGCAGAAGGTTACATGGTAATGTTGGTATACAAAAATGGGTCCCTTACCCGAGAAGATGTGCGCAACCGCTATGCAGAGAAATCTTGGGATGTTTTCAATAAATTTCTGCAGCAAACACAACCTTTAAATGGTTGGTATCACAAAGCTCCTTATCTGTTATCCATTCCCTGA 1161 0.4324 MAEISLPPGSYFLGFDSSTQSLKATVLNSNLNIVASELVHFDSDLPHYKTKDGVYRDPSGNGRIVSPTLMWVEALDLMFQKLSKSKLDFSKIAAVSGSGQQHGSVYWKTGSSQRLSSLDPKKPLLEQFENAFSLKESPIWMDCSTTAECRAIEKACGGAMELARVTGSRAYERYTGPQIKKLYDNQPEIYNNTERISLVSSFMASLFLGAYAAIDHTDGAGMNLMDINERAWSKVALEATAPGLESKLGNLAPAYAVAGNIAPYFVERYHFNKDCLVVQWSGDNPNSLAGLTLNIPGDLAISLGTSDTVFMITKDPNPGLEGHVFPNPVDAEGYMVMLVYKNGSLTREDVRNRYAEKSWDVFNKFLQQTQPLNGWYHKAPYLLSIP. 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00636 386 Gene3D - 6 311 - -
Seca4g00636 386 Pfam FGGY family of carbohydrate kinases, N-terminal domain 135 288 IPR018484 GO:0005975|GO:0016301
Seca4g00636 386 SUPERFAMILY Actin-like ATPase domain 296 382 IPR043129 -
Seca4g00636 386 FunFam Xylulose kinase 2 13 310 - -
Seca4g00636 386 PANTHER SUGAR KINASE 11 369 - -
Seca4g00636 386 Pfam FGGY family of carbohydrate kinases, C-terminal domain 299 371 IPR018485 GO:0005975|GO:0016301
Seca4g00636 386 SUPERFAMILY Actin-like ATPase domain 11 290 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00636 Seca-Chr4 10564660 10569088 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00636 K00854 - gmx:100778495 686.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00636 4 10564660 10569088 Seca4g00636 4 10564660 10569088 ECH