Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00625 ATGGCCGCTGCTTCTGCCAGAGACCAAGTTCTCTCCCTCCTCGCTTCCGCCAACAACCATGGCGACCTCTCCGTCAAAACCTCCTCCTTGAAACAAGCCAAAGACCTTCTTCTATCCATTGACCCTTCTCTCGCTGCCGACCTGTTCCCTTACATGCTCGAGCTTCAGTCTTCTCCTGAGACCCTCGTCCGCAAATTGCTCATCCAGATAATTGAGGAGATTGGTTTTAAAGCAGTTGAGCATTCTCCTCAACTGATATCTGTACTATTAACATTTTTACGAGACAGCGATGTAGCTGTCATAAAACAGTCTATTGTTAGTGGCACGAATATCTTCTGCAGTTGTTTTGAGGAGATGATTGTGCAGTTTCAACAATGTGGTAAAGTTGAGAGGTGGCTAGAAGAGATTTGGATGTGCATGCTTAGGTTCAAGGATGCTGTTTTTCGGATTGCTCTGGAGCCTGGTTCTGTTGGAACAAAGTTGCTGGCACTGAAATTCTTGGAAATATTTGTATTACTTTTCACATCTGACATCAGTGATCCTGAGAAGTCAGCCACAGAAGGAGTCAGGCAAGCTGTTAATATCTCATGGTTGGTGGGTGGTCACCCTGTTCTTGATCCAGTGATGCTTATGTCAGAGGCAAATAGAACAATTGGCATTTTAATAAATTTATTGCAGTCTGCTGGCAGTCTCCCTGGTTGTTTGACAATTACTGTTGTAAATTGTTTAGCAGCCATTGCAAGGAAAAGGCCACAACACTATGATGCTGTCCTTTCAGCATTGCTTGATTTTGATCCAAATTTTCAAACAGTGAAAGGATGTCATGTTGCTAGTATTCAGTATTCCTTAAGAACAGCTTTTTTGGGTTTTCTAAGATGCACTTATTCCCCTATACTAGAGTCAAGAGAAAGACTGATAAGGAGCCTGCGAGGTATGAATGCGGGGGATGCTGCTGATCAGGTCATTCGGCAAGTTGACAAAATGATAAAAAATGGTGATCGTTCTACCCGTGATGCCCGAATTAGCAAGGATGATCAACCATCAACCCAGTCACCTGTTACAGGGGAATTATCTAGAAAAAGACCTGTTCCTCTAGATAATGAGCAATTGGCCAATGGTCATGAGTCCATCTCTAAGCGGAATCGTTCTGGTCCTGATCCTCACTTTACTTTACCAGCTCAAATTAATGATTCTGGACAGGATCATAACTCTGTTAACGGGGTATCACCTAATATTCCTGTACTGGATAGTGAACTAGCTGCTGTGGAGCAAATGATTGCCGTGATTGGTGCTTTGCTTGCTGAAGGAGAAAGAGGCGCTGAATCTCTTGAAATCCTTATTTCGAAGATTCATCCCGATCTGTTGGCTGATATTGTCATAACTAATATGAAGCACTTGCCTAAGACACCCCCACCTCTAGCAAGGCTTGGGAATCCACCAGTAACTCGTCAAGTCAGTTCCCAAGTCAGTCAATCACAGGTTATAGCAGCATCTGCTCCAATAAGCTCTGTCCAATCCTTGCCTGTTACTGCCCAAGAACCATTCCCTTCAACTACAGCAACTGCCACTGCTTCATCACCATCTGACACCTCTAACTTTGGTAACCTGCCTGCTGATTCTAAACGTGATCCACGCCGGGATCCCCGTCGCATGGATCCGCGGCGTGTAGCGGTAACTCCTGGAGGAGCATCTGTCTCAATTACAGATGATACTGGGGCTGCAAAATTAGAGTTTGATGATCCCATGTCTTCTGTTAAGCCCGTTTCACATGCTGTTGCAAGCACTGATGACAATGCTCCATCAGATCCAACAATCAAAATAAAAAATGATGATATTATCTCTGAAGGGCCCCCAGTTTCAGGACCTGATCTGTTCACTCCCAAAACAGAGGTTGTTGAAAGGCCTGGAGATATTCACCGGATCATGGAAGCAAATGCCTCTTTGGATCCCTCAGTCACTTCCACTGATTTCAGAGATGAGGATCTGAGTACAGTAAAGCTGTCAGATGATACCGAAACTAATGGGACAGATTCATCATCTATTTCAGAGTTTGATCAGTTTTCCCCTGATAATCAAGTTGCCTCTACACCAGAAGATACCTGTCTGGAGTTACCACAGCTTCCACCATACATTGAACTGTCCAAAGAACAGGAAAGTAAAGTGAAACACATGGCTATTAGGCATATAATTGACTCGTACAAGCATTTGCACGGGACAGATTGTCAGCAGTTTTGCATGCCACTACTTGCTCGATTAGTGGCTCAGATTGATGACAAAAATGAAATTATTGTGATGCTGCAAAAACACATCCTGGAAGACCACTGGCGAAAGGGGCATGAACTTGTACTGCATGTTTTATACCATCTGCACTCCCTCATGATATTGGATTCAATTGGAAACTCTTCATCTTCTGCTGTTTTATATGAGAACTTTCTCTTGGGAGTGGCCAAAGCTCTGTTGGATTCTTTTCCAGCTTCAGACAAGTCTTTTAGTAGACTCCTTGGTGAAGCACCACTTTTGCCTGAATCTGCCTTCAAGATTTTGGATGATCTCTGCTATTCTGATGTTATTGATCATGATGGAAAAATTATCCGTGACATTGAGCGTGTAACTCAAGGCCTTGGTGCTATTTGGAGTTTAATTTTGGGGCGTCCACAAAATCGCCAAGCCTGCTTAGGAATAGCATTGAAGTGTGCAATCCACCCACAGGATGAGATTCGAGCAAAAGCTATTCGGCTGGTGACAAACAAGCTCTTTCAGCTTAGTTACATATCAGAAGATGTTGAGAAATTTGCAACAAAAATGCTTCTTTCTGGTGTAGATCATGAAGTTTCAGATACAGTGCAATCTGGACCTACTGAACAAAAAACCGAGGCACAGGTTGAAAGTCATGAAATATGTGGTACTTCACAGGTTTCAGAGTCCACAATTTCTGAAAATGACTCTTCTAGAGTTGCTAAACCAACAATTCAAAGTGTTACATCTATATCGTTTTCTGAAGCTCAACGGTTGATTTCTTTGTTTTTTGCTTTATGTACTAAGAAACCCAGTCTTCTACAGATTGTATTTAATGTCTATGGACGAGCTCCGAGAAGTGTAAAGCAGGCTTTTCATCGCCACATCCCTATTCTTGTGAGGGCATTAGGGCAATCTTATTCTGAATTGCTCCATATCATATCTGATCCACCACAAGGAAGTGAAAATCTTCTGACACTGGTACTGCAAATATTGACTCAAGACACAACACCATCTTCTGAGTTGATATCTACTGTTAAACGTCTATACGAAACTAAATTTAGAGATGTTACAATTCTTGTTCCGTTACTGTCATCGCTTTCCAAAAAAGAGGTTTTACCAATTTTCCCACGTCTTGTTGACCTTCCATTGGAAAAGTTTCAAAGGGCACTTGCTCACATTCTACAGGGTTCAGCTCATACAGGTCCAGCTTTAACACCTGTGGAAGTGTTGGTTGCAATCCATGGAATTGTTCCCGAGAAAGATGGCCTTGCACTTAAGAAGGCATGTCTTCTATCATTTTACATAATTACACTTATACTGAATCCCATTTCCCCCCATGCTTGCTCGGCTTGTTTTGAGCAGCGTACAGTGTTCACACAGCAGGTTCTTGCCAAGGCATTGAACCAGATGGTTGATCAAACTCCATTGCCTCTTCTTTTCATGAGAACAGTTATTCAGGCAATTGATGCTTTTCCTTCTCTGGTTGATTTTGTTATGGAGATACTCTCAAAACTTGTAACCAAACAGGTGTGGCGTATGCCAAAACTATGGGTTGGTTTCTTAAAATGTGTATATCAGACACAGCCACGTTCTTTTCATGTATTATTGCAGTTGCCACCTCAACAACTGGAAAGTGCACTCAACAGGCATGCTAATCTCAGAGGCCCCCTTGCTTCTTATGCCAACCAACCATCTGTAAAATCTTCACTTACTAGATCAACTTTAGCAGTTCTTGGTCTTGCGAATGAAACTCATGTGCAGCAACATTTGTCAACTTCATTACACCCTTCTGACACAAGTTCTTCAGTTAGTGGGGCAACTCTGACATGA 4068 0.426 MAAASARDQVLSLLASANNHGDLSVKTSSLKQAKDLLLSIDPSLAADLFPYMLELQSSPETLVRKLLIQIIEEIGFKAVEHSPQLISVLLTFLRDSDVAVIKQSIVSGTNIFCSCFEEMIVQFQQCGKVERWLEEIWMCMLRFKDAVFRIALEPGSVGTKLLALKFLEIFVLLFTSDISDPEKSATEGVRQAVNISWLVGGHPVLDPVMLMSEANRTIGILINLLQSAGSLPGCLTITVVNCLAAIARKRPQHYDAVLSALLDFDPNFQTVKGCHVASIQYSLRTAFLGFLRCTYSPILESRERLIRSLRGMNAGDAADQVIRQVDKMIKNGDRSTRDARISKDDQPSTQSPVTGELSRKRPVPLDNEQLANGHESISKRNRSGPDPHFTLPAQINDSGQDHNSVNGVSPNIPVLDSELAAVEQMIAVIGALLAEGERGAESLEILISKIHPDLLADIVITNMKHLPKTPPPLARLGNPPVTRQVSSQVSQSQVIAASAPISSVQSLPVTAQEPFPSTTATATASSPSDTSNFGNLPADSKRDPRRDPRRMDPRRVAVTPGGASVSITDDTGAAKLEFDDPMSSVKPVSHAVASTDDNAPSDPTIKIKNDDIISEGPPVSGPDLFTPKTEVVERPGDIHRIMEANASLDPSVTSTDFRDEDLSTVKLSDDTETNGTDSSSISEFDQFSPDNQVASTPEDTCLELPQLPPYIELSKEQESKVKHMAIRHIIDSYKHLHGTDCQQFCMPLLARLVAQIDDKNEIIVMLQKHILEDHWRKGHELVLHVLYHLHSLMILDSIGNSSSSAVLYENFLLGVAKALLDSFPASDKSFSRLLGEAPLLPESAFKILDDLCYSDVIDHDGKIIRDIERVTQGLGAIWSLILGRPQNRQACLGIALKCAIHPQDEIRAKAIRLVTNKLFQLSYISEDVEKFATKMLLSGVDHEVSDTVQSGPTEQKTEAQVESHEICGTSQVSESTISENDSSRVAKPTIQSVTSISFSEAQRLISLFFALCTKKPSLLQIVFNVYGRAPRSVKQAFHRHIPILVRALGQSYSELLHIISDPPQGSENLLTLVLQILTQDTTPSSELISTVKRLYETKFRDVTILVPLLSSLSKKEVLPIFPRLVDLPLEKFQRALAHILQGSAHTGPALTPVEVLVAIHGIVPEKDGLALKKACLLSFYIITLILNPISPHACSACFEQRTVFTQQVLAKALNQMVDQTPLPLLFMRTVIQAIDAFPSLVDFVMEILSKLVTKQVWRMPKLWVGFLKCVYQTQPRSFHVLLQLPPQQLESALNRHANLRGPLASYANQPSVKSSLTRSTLAVLGLANETHVQQHLSTSLHPSDTSSSVSGATLT. 1356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00625 1355 MobiDBLite consensus disorder prediction 668 696 - -
Seca4g00625 1355 MobiDBLite consensus disorder prediction 503 568 - -
Seca4g00625 1355 MobiDBLite consensus disorder prediction 663 696 - -
Seca4g00625 1355 SUPERFAMILY ARM repeat 8 921 IPR016024 -
Seca4g00625 1355 MobiDBLite consensus disorder prediction 592 628 - -
Seca4g00625 1355 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 1 1354 - -
Seca4g00625 1355 Pfam Symplekin tight junction protein C terminal 1101 1295 IPR022075 -
Seca4g00625 1355 Gene3D - 1 344 IPR011989 -
Seca4g00625 1355 MobiDBLite consensus disorder prediction 328 344 - -
Seca4g00625 1355 MobiDBLite consensus disorder prediction 503 537 - -
Seca4g00625 1355 MobiDBLite consensus disorder prediction 328 400 - -
Seca4g00625 1355 Pfam Symplekin/PTA1 N-terminal 97 319 IPR032460 -
Seca4g00625 1355 MobiDBLite consensus disorder prediction 539 554 - -
Seca4g00625 1355 MobiDBLite consensus disorder prediction 1335 1355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00625 Seca-Chr4 10269782 10294504 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00625 K06100 - gmx:100789876 2157.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00625 4 10269782 10294504 Seca4g00625 4 10269782 10294504 ECH