Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00623 ATGGAAGGTTGGGACCCGAATACGAAGTCGACGCTAACACAAATCCCTTTGCTGACAACAAAGGCAGGTCCTAGAGACGGAGCGGCATGGACGCAGAGGCTGAAAGAGGAGTACAAGTCTCTGATTGCTTACACTCAGATGAACAAGTCCAACGACAACGATTGGTTTCGGATCTCCGCCGCTAACCCCGAAGGTACCCGTTGGACCGGCAAATGTTGGTACGTTTACAACCTTCTCAAATATGAATTCGACCTCCAATTTGATATCCCTGTTACTTACCCTTCCACCGCACCCGAACTCGAGCTCCCTCAATTGGATGGCAAGACTCAGAAGATGTACAGGGGAGGAAAGATATGCTTGACTGTGCACTTCAAGCCTCTTTGGGCCAAAAATTGCCCTAGATTTGGTATAGCACATGCACTTTGCTTAGGCCTTGCCCCGTGGCTTGCAGCAGAGGTTCCCATTCTTGTGGATTCTGGTATGATCAAGCACAAAGACGATGCAACCACATCAACTGAGTCTTAG 525 0.4914 MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTQRLKEEYKSLIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWYVYNLLKYEFDLQFDIPVTYPSTAPELELPQLDGKTQKMYRGGKICLTVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDDATTSTES. 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00623 174 Gene3D Ubiquitin Conjugating Enzyme 1 170 IPR016135 -
Seca4g00623 174 PANTHER UBIQUITIN-FOLD MODIFIER-CONJUGATING ENZYME 1 5 171 IPR014806 GO:0061657|GO:0071569
Seca4g00623 174 PIRSF Ufc1 3 168 IPR014806 GO:0061657|GO:0071569
Seca4g00623 174 FunFam Ubiquitin-fold modifier-conjugating enzyme 1 1 170 - -
Seca4g00623 174 SUPERFAMILY UBC-like 5 164 IPR016135 -
Seca4g00623 174 Pfam Ubiquitin-fold modifier-conjugating enzyme 1 8 163 IPR014806 GO:0061657|GO:0071569
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00623 Seca-Chr4 10246473 10248521 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00623 K12165 - jre:108981889 365.925
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00623 4 10246473 10248521 Seca4g00623 4 10246473 10248521 ECH