Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00614 ATGCCCATTACCCTTCTCCTAAGTCATGACCCTATTTTACTAAATTCCACTTTCGTCCCCATTCTCATTTCAAAGCCTCGCAGTGCACGAGCACGACACCGTTCTCCTCATTTTCTCTGCTTCTCTTCTCGTTCAGATATGGATACTGCTGGAGGACAAGGTCTTTACCCATTGCACCGTTGTAAAACTCTTCACCTGGTTAGACATGCCCAAGGTTTTCACAATGTAGAAGGAGAAAAGAACCCTGACGCATACTTGTCTTATGATCTTTTTGATGCAAGCCTAACCCCTCTGGGCTGGGAGCAGGTTGATAATCTGAGAAATCATGTTAAGGCAACTGGTCTTTCCAAAAGAATTGAACTAGTTATTGTTTCCCCCTTGTTAAGGACCATGCAAACAGCAGTTGGAGTCTTTGGTGGTGAAGCATACACTGATGGGATTGATGCCCCTCCTCTGATGAATGACAATGTGGCAGATAGTGGTCGTCCTGCAATTTCTAGTCTAAACTGCCCTCCATTTACAGCAGTAGAGCTTTGCCGAGAGCATTTGGGGGTGCATCCTTGTGATAAGAGAAGAAGCATCACTGAGTATCGAAATATGTTTCCAGCAATTGATTTTTCACTGATAGAAAGTGATGAGGACATTCTGTGGAAACCTGACGTTAGAGAGAAGGATGAAGAAGTTGCTGCCAGGGGACTGAAGTTTTTGGAATGGTTGTGGACACGTAAAGAAAAGGAGATGGCTGTTGTTTCCCACAGCGGTTTTCTGTTTCATACCCTCAGTGCTTTTGGAAATGATTGTCATCCAACTGTGAAGAGTGAAATCTGCACACACTTTGCTAACTGTGAGCTGCGTTCAATAGTTATCGTTGATAGAGGTATGATTGGATCAGATGAATCGTCTACCAACTATCCTGGCAAAATTCCCCGCGGCCTTGACCTTCCTAGTGATATTGCTGACGAGAAACATGCAGAGAATGGGCCGGCGAAGTAA 993 0.4451 MPITLLLSHDPILLNSTFVPILISKPRSARARHRSPHFLCFSSRSDMDTAGGQGLYPLHRCKTLHLVRHAQGFHNVEGEKNPDAYLSYDLFDASLTPLGWEQVDNLRNHVKATGLSKRIELVIVSPLLRTMQTAVGVFGGEAYTDGIDAPPLMNDNVADSGRPAISSLNCPPFTAVELCREHLGVHPCDKRRSITEYRNMFPAIDFSLIESDEDILWKPDVREKDEEVAARGLKFLEWLWTRKEKEMAVVSHSGFLFHTLSAFGNDCHPTVKSEICTHFANCELRSIVIVDRGMIGSDESSTNYPGKIPRGLDLPSDIADEKHAENGPAK. 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00614 330 SMART PGAM_5 63 259 IPR013078 -
Seca4g00614 330 Gene3D - 62 302 IPR029033 -
Seca4g00614 330 MobiDBLite consensus disorder prediction 300 330 - -
Seca4g00614 330 SUPERFAMILY Phosphoglycerate mutase-like 62 292 IPR029033 -
Seca4g00614 330 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 58 297 - -
Seca4g00614 330 Pfam Histidine phosphatase superfamily (branch 1) 64 135 IPR013078 -
Seca4g00614 330 FunFam Phosphoglycerate mutase-like protein 1 58 305 - -
Seca4g00614 330 CDD HP_PGM_like 63 134 IPR013078 -
Seca4g00614 330 MobiDBLite consensus disorder prediction 314 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00614 Seca-Chr4 10053899 10061261 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00614 - - cam:101489637 549.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00614 4 10053899 10061261 Seca4g00614 4 10053899 10061261 ECH