Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00608 ATGGATTCGAAGGAGAACGACGACGTATCACCGATCGAGGAGGTTCGGCTGGTGGTTCCAAACGAAGATGACCCGAGCGTACCGGTTTGGACGTTCCGTATGTGGTTGATGGGGATAGCGTCGGTGATGTTGCTCTCATTCTTGAACACTTTCTTTGGGTTCAGAACAGAGCCTCTGACGGTGACGATGATATCGGTTCAGGTAGCGACGCTTCCAATCGGACGGTTCATGGCCAGTGTGCTCCCAACAAACAAGTTTCGAATTATGGGGAATGAGTTCTCTCTCAACCCAGGGCCCTTCAACATGAAGGAGCACGTGCTTATTTCCATATTCGCAAATGCTGGTGCTGCCTTTGGGAACGGTTCTGCTTATGCAGTTGGTATTGTTGATATAATCCGTGCCTTTTACGGCAGAAAGATCAACTTCTTGGCTAGTTGGCTTCTCGTCATGACAACGCAGGTATTGGGGTATGGATGGGCTGGGATAATGAGGAAGTACGTGGTGGAGCCGGCGCAGATGTGGTGGCCGGCCACTCTAGTGCAAGTTTCGTTGTTCAGGGCTTTGCATGAAAACGACAAGGCTCGGATGTCAAAAGGGAAGTTCTTTTTGATTGCGCTTATTTGCAGCTTCGCATGGTACGTCGTTCCCGGCTACCTATTTAGCACTTTATCAGTTATCTCGTGGGTTTGTTGGATATTTCCCAAATCCGTAACGGCCCATCAACTTGGGTCTGGCAAGAATGGGCTTGGTTTGGGCTCCTTCACCCTTGATTGGACCACTGTTGCTTCATTCCTTGGCAATCCACTTGTCACTCCCTTCTTTGCTGCTGCTAACATCATTGTCGGCTACATCTTATTAATCTATCTCCTCATCCCAGTTTCATATTGGGGACTTAATCTCTATAATGCCAAGACCTTCCCTATATACTCTAACAATCTATTCACTGCTCAAGGTCATAAATACAATGTCACAGCCATTGTCAACGATAAGTTTGAGATTGATATGCAGGCTTACCAGCAACTTGGTCGTGTCAACTTGAGTATCTTCTTTACTATTAGCTATGGTATTGGTTTTGCTGCCATTATCTCTACCCTCTCTCACGTCGCAGTTTTTAATGGCAGGGAGATATATCAACAATTCCGATCTTCCCAATCTGGAAAGGAAGACATTCACACAAGATTGATGAAGAAGTACAAAGACATACCTAATTGGTGGTTTCATGTGACGCTTTTGGCTTCATTTCTACTTGCACTTGCTCTCTGTGTTTTCATGAAAGATCAGGTACAATTGCCATGGTGGGGTCTCATCTTTGCAGCTGCGCTTGCACTAACTTTTACTCTCCCCATTAGCATCATAACGGCCACAACTAATCAGACTCCAGGTTTGAATATCATTACTGAGTACATCATGGGTGTGATTTCACCTGGCAAACCAATAGCCAATGTTTGCTTCAAGACCTATGGGTACATGAGTATGAATCAGGCCGTTTCCTTTCTATCTGATTTCAAGCTAGGACATTACATGAAGATCCCACCACGCTCAATGTTCATTGTTCAGATTGTTGGGACTCTGATAGCTGGAACAGTGGATGTTGGTGTGGCATGGTGGTTGCTAGGTACAGTAAAGAACATATGCAACGAAGAACTACTGCCCCCAGAAAGTCCATGGACTTGTCCGGGTGACCATGTCTTCTTTGATGCATCAGTGATTTGGGGTTTGGTGGGCCCAAAACGAATTTTTGGCCCTCTTGGGAATTACTCAAAGCTCAATTGGTTCTTCCTTATAGGAGCATTGGGTCCAGTAATTGTGTGGCTACTTCAGAAAGCCTTTCCTAAACAGAAATGGATATCGTTAATTCACATTCCTGTACTTTTTGGAGCAACTGCAAGCATGCCACCAGCTAGCACAGTGAACTTCAATTCATGGATTATTGTTGCCACAATCTTTAACTATTTTATATTCAAATATCATAAGAAGTGGTGGCAGAGGTATAATTATGTGTTGGCTGCAGCTTTGGATGCTGGATTGGCTTTCATGACGGTTCTTCTCTATTTTGCACTTAACATGGAGGATAAAACCCTCTCATGGTGGGGACAAGATGAGCACTGTCCTCTTGCCAAATGTCCAACAGCGAAAGGTGTAGTTGCTGAAGGGTGTCCTGTGTTTTGA 2169 0.4495 MDSKENDDVSPIEEVRLVVPNEDDPSVPVWTFRMWLMGIASVMLLSFLNTFFGFRTEPLTVTMISVQVATLPIGRFMASVLPTNKFRIMGNEFSLNPGPFNMKEHVLISIFANAGAAFGNGSAYAVGIVDIIRAFYGRKINFLASWLLVMTTQVLGYGWAGIMRKYVVEPAQMWWPATLVQVSLFRALHENDKARMSKGKFFLIALICSFAWYVVPGYLFSTLSVISWVCWIFPKSVTAHQLGSGKNGLGLGSFTLDWTTVASFLGNPLVTPFFAAANIIVGYILLIYLLIPVSYWGLNLYNAKTFPIYSNNLFTAQGHKYNVTAIVNDKFEIDMQAYQQLGRVNLSIFFTISYGIGFAAIISTLSHVAVFNGREIYQQFRSSQSGKEDIHTRLMKKYKDIPNWWFHVTLLASFLLALALCVFMKDQVQLPWWGLIFAAALALTFTLPISIITATTNQTPGLNIITEYIMGVISPGKPIANVCFKTYGYMSMNQAVSFLSDFKLGHYMKIPPRSMFIVQIVGTLIAGTVDVGVAWWLLGTVKNICNEELLPPESPWTCPGDHVFFDASVIWGLVGPKRIFGPLGNYSKLNWFFLIGALGPVIVWLLQKAFPKQKWISLIHIPVLFGATASMPPASTVNFNSWIIVATIFNYFIFKYHKKWWQRYNYVLAAALDAGLAFMTVLLYFALNMEDKTLSWWGQDEHCPLAKCPTAKGVVAEGCPVF. 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00608 722 PANTHER ISP4 LIKE PROTEIN 4 721 IPR004648 GO:0055085
Seca4g00608 722 NCBIfam OPT family oligopeptide transporter 13 688 IPR004813 GO:0035673
Seca4g00608 722 NCBIfam small oligopeptide transporter, OPT family 8 691 IPR004648 GO:0055085
Seca4g00608 722 Pfam OPT oligopeptide transporter protein 30 686 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00608 Seca-Chr4 9987037 9992238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g00608 2 721 Organic Solute Cotransporters AT5G64410 70.442 0.0 1117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00608 - - gmx:100785973 1211.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00608 4 9987037 9992238 Seca4g00608 4 9987037 9992238 ECH