Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00577 ATGCCCATCGTGACGAAGCTTCAGTCTTATGCTAAACCGGTTTCTAAACCGCGAGACATTTTGAAACCGGCCGGAAACAGAGTTGCCGTTTCAGAAGAACCGAAACGCAAGAAGGAGAATCCACAACGCGCGAGAAAAGAGGTGCAGGAAATTTGTGACTCCATTGTCCGAAGCAACGTGTCTGTGGACAGCACATGTTCAACGGACTCCTCTAACTCTTCGAGCAATTCATCAGCGGCAAGTAGGAGGACGGTGAAGCGGAACGGGTTTAAGCCGGTAAGGGTTGTGCCGGATGCGGTTGATGTAGCTACATTGTCTCCACCTCCCAAGGGTTCAGCACCGCCCAAAAGGTGTGATTGGATCACACCAAATTCCGATAGGACTGTCATTTCATTCTTAACAGACCCTCTTTATGCTGCTTTCCATGATGAAGAATGGGGTGTTCCAGTTGATGATGATAGAAAGCTATTTGAGCTTCTAATCTATTCACAAGCATTAGCAGAACACAGTTGGCCAGCAATTCTTAACCACAGAGACATATTCAGGAAGCTTTTTGAAAATTTTGACCCGTCGTCAATTGCACAGTTTACTGAGAAGAAGTTGCTAACGCTGAGAATAAACGGCAACCTATTGTTATCAGAACCAAAGCTCCGTGCCATTGTGGAAAATGCTAAACAATTACTTAAGGTTCAGCAGGAGTTTGGTTCATTCAGCAATTACTGCTGGAGATTTGTGAACCACAAGCCAATAAGAAATGAATTTCGATATGGACGTCAAGTACCTGTGAAGACTCCAAAAGCAGAGCTCATTAGCAAGGACATGATCCGCAGAGGTTTCCAATGTGTGGGACCCACGGTGGTTTATTCGTTCATGCAAGTAGCAGGACTCGTTAATGATCACTTAATAACATGCTTCAGGTACCAGGAATGCAATTTGACAACCAAAAACGAATTTAAAACTGAGGTTAAGGAGAAAAAGGGTACAACATGA 990 0.4434 MPIVTKLQSYAKPVSKPRDILKPAGNRVAVSEEPKRKKENPQRARKEVQEICDSIVRSNVSVDSTCSTDSSNSSSNSSAASRRTVKRNGFKPVRVVPDAVDVATLSPPPKGSAPPKRCDWITPNSDRTVISFLTDPLYAAFHDEEWGVPVDDDRKLFELLIYSQALAEHSWPAILNHRDIFRKLFENFDPSSIAQFTEKKLLTLRINGNLLLSEPKLRAIVENAKQLLKVQQEFGSFSNYCWRFVNHKPIRNEFRYGRQVPVKTPKAELISKDMIRRGFQCVGPTVVYSFMQVAGLVNDHLITCFRYQECNLTTKNEFKTEVKEKKGTT. 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00577 329 PANTHER OS04G0501200 PROTEIN 17 316 - -
Seca4g00577 329 MobiDBLite consensus disorder prediction 62 84 - -
Seca4g00577 329 MobiDBLite consensus disorder prediction 1 49 - -
Seca4g00577 329 Gene3D Hypothetical protein; domain 2 116 308 - -
Seca4g00577 329 Pfam Methyladenine glycosylase 134 306 IPR005019 GO:0006284|GO:0008725
Seca4g00577 329 MobiDBLite consensus disorder prediction 29 49 - -
Seca4g00577 329 MobiDBLite consensus disorder prediction 62 88 - -
Seca4g00577 329 SUPERFAMILY DNA-glycosylase 116 310 IPR011257 GO:0003824|GO:0006281
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00577 Seca-Chr4 9408557 9411663 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00577 K01246 - gmx:100306457 449.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00577 4 9408557 9411663 Seca4g00577 4 9408557 9411663 ECH