Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00571 ATGGATGAGGATGCCATTTCAAGTCTCTCTCTACGGGTGAAGCTAAATTTGACTGTTTGGGAATTTGTACTTCCTGAAACTCCTTCTCTCCCTGCTGTCTTCGGTATATCTGATACTGTAATTGAGGACCGCTTTGGCGTTCAACATGGGACAGCTGAGTGGTATGAGGCATTGGATCAGCAATTCAAATGGCTTCTTCAATATAAAATCAGCCCCTATTTTTGCAAATGGGCTGATGGCATGCGTGTTTTGACATACACATGTCCATGGCCAGCGGATCATCCAAAATCAGATGAATATTTTTCAGACCCACGGTTGGCAGCATATGCTGTGCCATACCGACAAGTAGTCTCCGGTAATGATGCAGCGAAGGATTACTTGCAGAAACAAGTTGAGATATTGAGAACCAAGACTCACTGGAGAAAAGCTTACTTTTACTTGTGGGATGAGCCACTGAATTTGGAACAATATGATTCTGTTCGCAATATGGCAAGTGAGATTCATGCTTATGCTCCAGATGCTCGTATATTAACTACTTATTATTGTGGGCCAAACGATGCACCTCTTGCACCTACTCCGTTTGAGGCTTTTGTAAAAGTTCCAAGTTTTCTGCGTCCTCATAATCAAATTTACTGTACAAGTGAATGGGTTCTGGGAAATCGAGAGGACCTGGTCAAGGATATTATTGCTGAATTACAACCAGAGAATGGTGAGGAATGGTGGACATATGTCTGTATGGGACCATCAGATCCTCATCCAAATTGGCATCTTGGAATGCGAGGCACTCAACACCGTGCTGTCATGTGGCGTGTGTGGAAAGAGGGTGGCACAGGATTTTTGTACTGGGGTGCTAACTGCTATGAGAAAGCAACTGTAGCCAGTGCAGAGATAAAATTCAGGCACGGCCTTCCCCCTGGAGATGGAGTTCTATACTACCCTGGTGAGGTGTTCTCAACTTCTCATCAACCAGTGGCATCTATTAGACTAGAGCGCATACTTAATGGCTTGCAGGACATCGAATACCTGAGACTATATGCTTCGAGATATGGTAGGGACGAAGCTATTGGGCTTTTGGAGAGGACAGGAGTGTATTTTGGTCCTGAGCGTTACACATTCGAGCACATGCCAATTGATGCAATGAGGGGACAAATATTCAATGCCTGCCGCTCATGA 1173 0.4467 MDEDAISSLSLRVKLNLTVWEFVLPETPSLPAVFGISDTVIEDRFGVQHGTAEWYEALDQQFKWLLQYKISPYFCKWADGMRVLTYTCPWPADHPKSDEYFSDPRLAAYAVPYRQVVSGNDAAKDYLQKQVEILRTKTHWRKAYFYLWDEPLNLEQYDSVRNMASEIHAYAPDARILTTYYCGPNDAPLAPTPFEAFVKVPSFLRPHNQIYCTSEWVLGNREDLVKDIIAELQPENGEEWWTYVCMGPSDPHPNWHLGMRGTQHRAVMWRVWKEGGTGFLYWGANCYEKATVASAEIKFRHGLPPGDGVLYYPGEVFSTSHQPVASIRLERILNGLQDIEYLRLYASRYGRDEAIGLLERTGVYFGPERYTFEHMPIDAMRGQIFNACRS. 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00571 390 Pfam Domain of unknown function (DUF4091) 277 345 IPR025150 -
Seca4g00571 390 PANTHER ALPHA-1,6-MANNOSYL-GLYCOPROTEIN 2-BETA-N-ACETYLGLUCOSAMINYLTRANSFERASE 1 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00571 Seca-Chr4 9235120 9241754 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00571 - - gmx:100782659 813.913
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00571 4 9235120 9241754 Seca4g00571 4 9235120 9241754 ECH