Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00558 ATGTCTGATCAAGTAAATGCCTTGCCTGATGACCAAACATGGCCAGAGCTAAAGCTTCCAGACTTGTTGCATAGTGATTCTGTTCGACAAGTCCATGCAACTATTGAAAAAGAATGGGATTTCCTTCAAAGGTCTGCTTGCCAAACTGCTGCAGGAAGGGCTCTATGGAAGCATGTGATCCATGATCCACTCGCTTCCTTACTGGCTGGAGAGACTTACTTGAGAAACCTTCATGAAAAGATCAAGAAAGACTGTCTCAACAATGCGCGTGAAATTTCCGGAGTCATTCTTGCCGTTCGAACCCTTTGGTTTGACTCTAGACTGGAAGATGCTCTCAATTCCCCCAATGGCAGAGAAGCACAGGTTGTTCTCCTTGGTGCAGGAATGGATACAAGAGCATATCGTTTGAGTTGCTTAAAGGACAGCGATGTCTTTGAGGTTGACTTTCCAGATGTCTTGGAGGTGAAAACTACTATTTTGCAAGCGGCTAAGGAATCCACATACGATTCACAGCATATTATGTCCAAAGCTAAATCCTTAACCAGAGTGGCAGCTGACATAAGGGAAAGTGATTGGATGGAAAAGCTTCAAATTGCAGGTTTCTTGCCACAGAAGAGCACGGTTTGGATTCTAGAAGGTATCCTCTATTACCTCAACCAATCCCACGCCATGCAAGTGCTGAGGATTTTAGCTAACAATTGCGCCCTAACTCACACGGTCCTCTTAGCAGACTTCATGAATAAGCCATCAACCACGCTATCCAATTCAGCATTCCAATTTTACAGTGATTGGCCAGACCATCTCTTGCCATCCATTGGCTTCACTCATGTAAAACTTTCACAAATTGGAGACCCAGATGCCCATTTCGGCCTCTTGAATGATCCGTTAAACCTCTTCAACAAGCTCCGTAGCTTGCCTAGGTCATTACAAACCAATCCAGATGATGGAACACCATGCTGTCGCTTGTACTTGGTGGAAGCTTCTGGTTCACCCGATCAATGTGCTGCGCATAAAGGGTCAATCACTCAGTCCTGA 1035 0.4502 MSDQVNALPDDQTWPELKLPDLLHSDSVRQVHATIEKEWDFLQRSACQTAAGRALWKHVIHDPLASLLAGETYLRNLHEKIKKDCLNNAREISGVILAVRTLWFDSRLEDALNSPNGREAQVVLLGAGMDTRAYRLSCLKDSDVFEVDFPDVLEVKTTILQAAKESTYDSQHIMSKAKSLTRVAADIRESDWMEKLQIAGFLPQKSTVWILEGILYYLNQSHAMQVLRILANNCALTHTVLLADFMNKPSTTLSNSAFQFYSDWPDHLLPSIGFTHVKLSQIGDPDAHFGLLNDPLNLFNKLRSLPRSLQTNPDDGTPCCRLYLVEASGSPDQCAAHKGSITQS. 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00558 344 NCBIfam SAM-dependent methyltransferase 56 246 IPR011610 GO:0008168
Seca4g00558 344 Pfam Leucine carboxyl methyltransferase 46 229 IPR007213 GO:0008168|GO:0032259
Seca4g00558 344 Gene3D Vaccinia Virus protein VP39 36 287 IPR029063 -
Seca4g00558 344 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 43 325 IPR029063 -
Seca4g00558 344 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE YKTD-RELATED 16 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00558 Seca-Chr4 9038437 9040440 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00558 - - gmx:100800317 621.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00558 4 9038437 9040440 Seca4g00558 4 9038437 9040440 ECH