Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00544 ATGCTAGGAATTTACCGAATATTACTGCGGCTTCGCCAAAACCCTCCAAGGGCTGCATTATTTCAACACTTCCACGGGAATGGAATCCTTAGCCTAAACAAGAAGTCCTCAGGTTTTGGACGTGTCACATCCTCTCCATCCATGCAGCAGAAAGGGTTGGAGAATGTTACAGTGTCAGAGGTACTAATGACAAAGGGGGAAGAAAAAGTTGGTTCGTGGCTTTCCTGCAGAGTTGATGATTCTGTTATTGATGCAATGAAGAATATGGCTGAAAATGATATTGGATCATTAGTGGTACTAAAGCCAGAGGGGGAACATATAGCAGGCATTGTCACAGAACGAGGTATGCGCCAGTGTCATCGTTATTGA 369 0.4417 MLGIYRILLRLRQNPPRAALFQHFHGNGILSLNKKSSGFGRVTSSPSMQQKGLENVTVSEVLMTKGEEKVGSWLSCRVDDSVIDAMKNMAENDIGSLVVLKPEGEHIAGIVTERGMRQCHRY. 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00544 122 SUPERFAMILY CBS-domain pair 55 120 IPR046342 -
Seca4g00544 122 Pfam CBS domain 59 114 IPR000644 -
Seca4g00544 122 ProSiteProfiles CBS domain profile. 63 122 IPR000644 -
Seca4g00544 122 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSX3, MITOCHONDRIAL 17 116 - -
Seca4g00544 122 Gene3D - 51 120 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00544 Seca-Chr4 8936937 8942406 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00544 - - gmx:100778020 182.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00544 4 8936937 8942406 Seca4g00544 4 8936937 8942406 ECH