Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00540 ATGGCTGAGAAAAGCAAGATTTTGATCATCGGAGGCACCGGCTACATCGGTAAATTTATAGTGGAAGCAAGCGCAAAAGCTGGACACCCCACTTATGCTTTGGTCAGGGAATCCACCATCACTGACCCTGCCAAGGCTAAAATCATCGACAGTTTCAAGGCTTTGGGCGTTCATTTGGTCCCTGGGGATTTCAACGATCATGACAACCTCTTGAACGCCATCAAGAAGGTTGATGTGGTCATATCTACGGTGGGTCACATGCAGCTTACCGATCAGCTCAAGGTCATCGCTGCCATTAAAGAGGCTGGTAACATTAAGAGATTTTTGCCATCAGAATTTGGGAACGATGTTGATCGTGTCCACGCTGTAGAGCCAGCAAAATCTGCATTTGCTACCAAAGCCCAAATTCGACGTGCTATTGAAGCCGAAGGCCTACCCTATACATACGTCTCCAGCAACTACTTTAATGGCTATTTTCTGTCCACATTAGCCCAACCAGGAGTCACTGCTCCACCCAGAGACAAAGCCATTATCTTGGGCGATGGAAATGTCAAAGGTAACAATAACATTATCCACTACATTTAG 585 0.4615 MAEKSKILIIGGTGYIGKFIVEASAKAGHPTYALVRESTITDPAKAKIIDSFKALGVHLVPGDFNDHDNLLNAIKKVDVVISTVGHMQLTDQLKVIAAIKEAGNIKRFLPSEFGNDVDRVHAVEPAKSAFATKAQIRRAIEAEGLPYTYVSSNYFNGYFLSTLAQPGVTAPPRDKAIILGDGNVKGNNNIIHYI. 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00540 194 Gene3D - 6 151 - -
Seca4g00540 194 PANTHER PINORESINOL REDUCTASE-RELATED 3 186 - -
Seca4g00540 194 FunFam Bifunctional pinoresinol-lariciresinol reductase 1 6 171 - -
Seca4g00540 194 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 185 IPR036291 -
Seca4g00540 194 Gene3D - 152 186 - -
Seca4g00540 194 Pfam NmrA-like family 7 187 IPR008030 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00540 Seca-Chr4 8857458 8860469 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00540 K23050 - jre:109007127 300.441
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00540 4 8857458 8860469 Seca4g00540 4 8857458 8860469 ECH