Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00504 ATGGCATTCCCACTCCCACAGCTTATCCCTTCACCTCAATCTCCGTCTCTACCTCACATAAACCTCACTACACTCTCCTTAAACCCTAAATTCCCATCATCAACACGCCAGCATCTTCATGTCATCCACCACCACCGCCGCCGCCGGAAGGCAAATTCCCTCCTCCGGTGTTCGGCGTCGTCTTTCTCGGAGAAGCACCACACCAACTCCCCCAAGTCTGACGATGTGGTGGAACTCCCTCTGTTCCCTCTCCCACTGGTCCTCTTCCCCGGCGCCATTCTTCCTCTCCAGATCTTCGAGTTCCGGTACCGCATCATGATGCACACTCTCCTCCACACCGATCTCCGCTTCGGCGTCATCTACACCGATGCCGTTACGGGAACCGCGGACGTCGGTTGCGTCGGAGAAGTCATCAAACACGAGCGACTCGTCGATGACCGCTTCTTCTTAATCTGCAAAGGTCAGGAGCGGTTCCGCGTCACCAACGTGGTCCGAACCAAGCCCTATCTGGTGGCTCGGGTCACGTGGCTCGAGGATAGGCCTTCTCCTTCCGCAGACGTTGATTTGGATGGTTTGGCCAACGAGGTGGAGACCTATATGAAGGACGTTATTCGGTTATCGAATCGGTTGGGTGGGAAGCCGGAGAAGGAGGTTGGAGATTTGAGGAGGAACTTGTTCCCGACGCCATTTTCTTTCTTTGTTGGGAGCACTTTCGAGGGTGCACCCAGAGAGCAACAAGCTCTGCTTGAATTAGAGGACACCGCTGCCAGATTGAAGAGGGAGAAGGAAACATTGAGGAATACGCTTAATTACCTCTCTGCTGCCTCTGCTGTCAAAGACGTATTTCCTTCTAATTCTTCTTCTTCTTCTTGA 873 0.5349 MAFPLPQLIPSPQSPSLPHINLTTLSLNPKFPSSTRQHLHVIHHHRRRRKANSLLRCSASSFSEKHHTNSPKSDDVVELPLFPLPLVLFPGAILPLQIFEFRYRIMMHTLLHTDLRFGVIYTDAVTGTADVGCVGEVIKHERLVDDRFFLICKGQERFRVTNVVRTKPYLVARVTWLEDRPSPSADVDLDGLANEVETYMKDVIRLSNRLGGKPEKEVGDLRRNLFPTPFSFFVGSTFEGAPREQQALLELEDTAARLKREKETLRNTLNYLSAASAVKDVFPSNSSSSS. 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00504 290 Coils Coil 241 275 - -
Seca4g00504 290 ProSiteProfiles Lon N-terminal domain profile. 79 267 IPR003111 -
Seca4g00504 290 SUPERFAMILY PUA domain-like 78 266 IPR015947 -
Seca4g00504 290 PANTHER ATP-DEPENDENT PROTEASE LA (LON) DOMAIN PROTEIN 31 288 - -
Seca4g00504 290 SMART lon_5 78 267 IPR003111 -
Seca4g00504 290 Pfam ATP-dependent protease La (LON) substrate-binding domain 78 265 IPR003111 -
Seca4g00504 290 Coils Coil 288 290 - -
Seca4g00504 290 Coils Coil 189 209 - -
Seca4g00504 290 Gene3D - 60 177 IPR046336 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00504 Seca-Chr4 8243110 8243982 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00504 - - gmx:100807718 457.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00504 4 8243110 8243982 Seca4g00504 4 8243110 8243982 ECH