Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00490 ATGCACAACCCTTCTTCCTTCTTCTCTAAGTTCAATTCAATTCAATTCAGCATGGCAGCCCCAGGCCCCACATCGGAGATTGAGCTTGTCATAGAAAAAACCACCTCCACCATTGTTAGCCATAAACGCAGCAGCATCAATAATAATCGTGAATCAGCGTCGTTGATGGTTGCAAGGCGCTCGTTAATGTCTATACTAATAAAATTTCATGCAGGTTATTTCAGAATAAGCCTCTCCCTTGGTGGCCAAGCTTTATTATGGAAGACACTAATTGGACCAACAGATGACAAGAGCACTCTGCGTCACGTGCTTCACATGCTTCCCGCCACTGCTTTCCTTGTACTATGGTCTCTGGCTCTCTTTATACTCATATTACTCTCTCTTCTTTACCTCTTAAGGTGCTTGTTTTTCTTTAAGATGGTAAAGGCCGAGTTCTTGCACCATGTAGGTGTTAACTATCTCTTCGCTCCATGGATTTCTTGGCTCCTATTGCTTCAATCAGCACCATTCGTCGCTCCAAAGACCGCCACCTATTTGATTCTCTGGTGGCTCTTTGCGGTTCCGGTGGTGGCGCTTGATGTCAAAATCTATGGCCAATGGTTCACCAAGGGGAAGAGGTTTTTGTCCACGGTGGCAAACCCAACGAGTCAATTGTCGGTTATAGGGAACTTAGTGGGGGCCCAAGCTGCGGCCCATATGGGCTGGAAAGAGAGTGCTGTTTGCTTGTTTTCATTAGGGATGGTGCATTATTTGGTGTTGTTTGTTACACTGTATCAGAGATTATCAGGTGGAGATCGACTTCCAGTGTTGTTAAGGCCCGTTTTCTTCTTGTTCTTTGCAGCACCTGGCGTGGCGAGCTTGGCTTGGGAATCTATCGTTGGCGCTTTTGATACTCTTTCCAAGATGCTATTCTTTCTATCCCTATTCCTCTTCATGTCACTGGTATGCAGGCCAACCCTGTTTAGGAGATCCATGAGAAGGTTTAATGTTGCATGGTGGGCTTACTCATTTCCAGTTACCGTGCTTGCTTTAGCTTCCACGGACTATGCAGAAGAAGTCAAAGGAACTATTTCCCACATCCTAATGCTCCTTCTCTTAGTTCTTTCTGTTCTAGTCTCCTTTGCTCTAACGGTGTTCACTTTGCTCAACTCTAAGATGCTTCTACCAGATAACGATCCCATTGCAAGCTTGCTCATTGGTTAA 1203 0.4522 MHNPSSFFSKFNSIQFSMAAPGPTSEIELVIEKTTSTIVSHKRSSINNNRESASLMVARRSLMSILIKFHAGYFRISLSLGGQALLWKTLIGPTDDKSTLRHVLHMLPATAFLVLWSLALFILILLSLLYLLRCLFFFKMVKAEFLHHVGVNYLFAPWISWLLLLQSAPFVAPKTATYLILWWLFAVPVVALDVKIYGQWFTKGKRFLSTVANPTSQLSVIGNLVGAQAAAHMGWKESAVCLFSLGMVHYLVLFVTLYQRLSGGDRLPVLLRPVFFLFFAAPGVASLAWESIVGAFDTLSKMLFFLSLFLFMSLVCRPTLFRRSMRRFNVAWWAYSFPVTVLALASTDYAEEVKGTISHILMLLLLVLSVLVSFALTVFTLLNSKMLLPDNDPIASLLIG. 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00490 400 Pfam Voltage-dependent anion channel 68 381 IPR004695 GO:0016020|GO:0055085
Seca4g00490 400 Gene3D - 63 388 IPR038665 -
Seca4g00490 400 CDD TDT_SLAC1_like 69 380 - -
Seca4g00490 400 FunFam S-type anion channel SLAH1 63 388 - -
Seca4g00490 400 PANTHER S-TYPE ANION CHANNEL SLAH3 42 394 IPR030183 GO:0006873|GO:0008308|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00490 Seca-Chr4 7960558 7963323 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00490 K26672 - gmx:100787036 541.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00490 4 7960558 7963323 Seca4g00490 4 7960558 7963323 ECH