Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00458 ATGCTGAAGTTCCTATCAAAAGTGAGAATCGAGTTCAACGCGCTGGACCCGCGAATGGCGTCGTGTATGGAGTTTCTGGCACAATGCAACTCGCGAAAGGCGAAAGAATCAAATCCGGCTTGCGAAGTAGAGGTAAAGCGTGGAAATGTGGATCACCCGCCGCAGATCACGGTGACGTTCGTGAATGGTGTGGAACAAGCGTTCGATGCAACATCCACACCAGCTCACAACATAAGGAACATGATTCTCGAGAAAGGTCAGCTTCTTGAGACGGAGCAGATGTTCCGTGAGGCAGGGGAGTCCTGGCCTGTTATCATCCCCGACGAGGAGCTCTCACAATCCGCACCTGGCACCAAGGTTCGCTTCCCTTATACACAATTCCCTTTATTGCTTTGCTTCTGTATGTTTATGGAGATGTTTTGA 423 0.5012 MLKFLSKVRIEFNALDPRMASCMEFLAQCNSRKAKESNPACEVEVKRGNVDHPPQITVTFVNGVEQAFDATSTPAHNIRNMILEKGQLLETEQMFREAGESWPVIIPDEELSQSAPGTKVRFPYTQFPLLLCFCMFMEMF. 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00458 140 Gene3D Glutaredoxin 1 99 - -
Seca4g00458 140 PANTHER 39S RIBOSOMAL PROTEIN L53, MITOCHONDRIAL 1 121 - -
Seca4g00458 140 Pfam 39S ribosomal protein L53/MRP-L53 12 63 IPR019716 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00458 Seca-Chr4 7402184 7402606 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00458 K17434 - tcc:18591518 211.075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00458 4 7402184 7402606 Seca4g00458 4 7402184 7402606 ECH