Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00442 ATGGAAATTCAACAGCAACCCACCAAGTCTAGGTTCAGACGCATCTGTGTTTATTGTGGTAGCAGCCCTGGAAAGAGCCCCAGCTACCAACTCGCTGCTATTCAACTTGGAGAACAATTGGTGGAGAGGAACATTGACTTGGTTTATGGAGGAGGGAGCATTGGGTTGATGGGTCTAATCTCACAAGTTGTGTATGATGGTGGACGCCACGTGTTAGGTGCTTATGATCATGAATCTTCCTTCCTCTGCTGCAGAGTGATTCCAAAGACACTTATGCCAAGAGAGATCACTGGAGAGACTATAGGAGAAGTAAGAGCTGTATCAGGCATGCACCAACGCAAGGCTGAAATGGCTCGACAAGCTGATGCATTTATTGCCCTGCCAGGTGGATATGGTACCCTGGAAGAACTACTGGAAATAATCACCTGGGCTCAACTAGGTATCCATGATAAACCGGTGGGGTTGTTGAACGTGGATGGGTACTACAACTCGCTGTTGGCATTCATGGACAAAGCTGTGGATGAAGGTTTTGTAACTCCAGCTGCCCGTCACATTATTGTTTCTGCCCATACTGCCCAAGACCTCATGTGCAAGCTTGAGGAATATGTCCCAAAGCACTGTGGTGTGGCCCCTAAACTAAGTTGGGAGATGGAGCAACAGTTAGTTAACACTGCAAAGTCAGATATTTCTCGTTGA 696 0.4713 MEIQQQPTKSRFRRICVYCGSSPGKSPSYQLAAIQLGEQLVERNIDLVYGGGSIGLMGLISQVVYDGGRHVLGAYDHESSFLCCRVIPKTLMPREITGETIGEVRAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEIITWAQLGIHDKPVGLLNVDGYYNSLLAFMDKAVDEGFVTPAARHIIVSAHTAQDLMCKLEEYVPKHCGVAPKLSWEMEQQLVNTAKSDISR. 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00442 231 NCBIfam Rossman fold protein, TIGR00730 family 14 202 IPR005269 GO:0009691|GO:0016787
Seca4g00442 231 FunFam CASP-like protein 3 201 - -
Seca4g00442 231 Pfam Possible lysine decarboxylase 74 198 IPR031100 -
Seca4g00442 231 SUPERFAMILY MCP/YpsA-like 11 202 - -
Seca4g00442 231 PANTHER LOG FAMILY PROTEIN YJL055W 3 221 - -
Seca4g00442 231 Gene3D - 2 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00442 Seca-Chr4 7155011 7157683 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00442 K22522 - gmx:100782787 402.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00442 4 7155011 7157683 Seca4g00442 4 7155011 7157683 ECH