Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00415 ATGGGAGCGGTTTGCTCTGCTGGCATGGTTGGGAGAAATGCAGAACTTGGAGGGAAGACTTTGGGGTTTTCTGGGAAGCTTAGCAAGGAAAATAGCTTTATGAACGGGAAAGAAACTTTTTCAGGTTCAAGGTCTAATAATGGTCATGGTAAAAAGCACAAGAAGCAAGACGCTGGGTTTTCTAATGAATTTAGCTTATCCACTCCCACTCCAACCGGGGGAAAACAGGTCACACAGAGGGGCTCTTTTCTGGCAAAAGCTGGTGAGAGGGCTGTAGAAGTTCTAGACACACTTGGAAGTGGCATGACAAAGTTAAACACCAGTAGTGGATTTGTTTCTGGCATGGCTTCTAAAGGGAATAAAATATCAATATTGGCATTTGAAGTAGCTAATACGATAACCAAAGGAGCAATTTTGTTTCAGTCACTTTCTGAAGAAAACATTCAGTTCCTTAAAAAGGAGGTTTTACAATCGGAAGGGATTCAACAATTAGTGTCAACTGATACGAAGGAGTTACTAAGTTTTGCTGAGGCTAACAAAAGGGAAGAATTAAATGTCTTCTCCCGGGAAGTGGCTAGATTTGGAAATAGGTGTAAGGACCCTCAGTGGCACAACCTAGATCGATATTTCTCAAGATTAGACTTGGATGTCTTGGGTGACAAACAATATCGGGTAGAAGCAGAAAAGACAATGCAGGAGTTTACCAGTCTAATTCAGCATACTACTGAATTATACCATGAATTAAATGCTTATGAACGTTTTGAACAAGACTATCAGCAAAAGATTAAGGAAATGGAGTCCTTAAATCTTCCTCTAAAAGGGGAGAGTATCACAATTTTTCAAAGCGAGCTAAAGCATCAAAAAAAGCTTGTGAGGAGCTTGAAAAAAAAGTCTCTTTGGTCCAGAAACTTGGAGGAGGTAGTTGAAAAGCTCGTTGATATTGTTACCTATATACATCAAGCAATTCGTGAGTTCCTTGGAAATCATGGTACAGGTGCTACCAAGTATGGTAAGGCTCCTGAAAGACTAGGTGAAGCTGGTCTTGCACTACACTATGCTAACATCATCAATCAGATAAATATGATTGCATCTCGCCCATCCGCTCTTCCTCCAAATGCGAGAGACACATTATATCATGGTTTGCCCAACAATATTAAGAGTGCTCTTCCATCCCGGTTGCAAACCATTTCTCCCATGAAAGAGCTGTCCATCACTCAGATCAAAGCCGAAATGGATAAGACTCTTCAGTGGCTTGTACCATTTGCCACAAATACAATCAAAGCACATCAAGGTTTCGGATGGGTTGGTGAATGGGCAAACACAAGTAGTGACTTTGGTGATAACACAGCCAAAGAAAGTCCCTTGATTCGCCTCCAGACACTTTATTACGCTGATAAGCAGAAGATAGATCTTTACATTATTGAATTGTTGGCATGGCTTCACCATTTGATTAGCTCAGTAAGATCCAGACAAAATGCCATGAGGCCAATGCCCACACGATCTCCTCCCAAGGGACATGAACTTCAGTCTAAGATGCGACAGTTTCTAATTCTATCAGTGGACCATAGCAATAAGCCATTGGGAACTCAAATTTCAGAAGAGGATAGGAGATTATTAGAGGAGGTACTTGCAAGAAGAAGAAGCCCAGGGATTAGCAAGAGCGAGGAACTTGGTGTGGCCAAGAAAACAGAAGCCAGACATTGGCTTAGGACCAAAAGTGCTGGGAGTTCACCTGTTAAGGAGTTCTTCGGTACAAGACTCATAGCCACCCACCAAAATTATAACGTTTTGGATATTATGGATGGCTTAGGATATTGA 1818 0.4153 MGAVCSAGMVGRNAELGGKTLGFSGKLSKENSFMNGKETFSGSRSNNGHGKKHKKQDAGFSNEFSLSTPTPTGGKQVTQRGSFLAKAGERAVEVLDTLGSGMTKLNTSSGFVSGMASKGNKISILAFEVANTITKGAILFQSLSEENIQFLKKEVLQSEGIQQLVSTDTKELLSFAEANKREELNVFSREVARFGNRCKDPQWHNLDRYFSRLDLDVLGDKQYRVEAEKTMQEFTSLIQHTTELYHELNAYERFEQDYQQKIKEMESLNLPLKGESITIFQSELKHQKKLVRSLKKKSLWSRNLEEVVEKLVDIVTYIHQAIREFLGNHGTGATKYGKAPERLGEAGLALHYANIINQINMIASRPSALPPNARDTLYHGLPNNIKSALPSRLQTISPMKELSITQIKAEMDKTLQWLVPFATNTIKAHQGFGWVGEWANTSSDFGDNTAKESPLIRLQTLYYADKQKIDLYIIELLAWLHHLISSVRSRQNAMRPMPTRSPPKGHELQSKMRQFLILSVDHSNKPLGTQISEEDRRLLEEVLARRRSPGISKSEELGVAKKTEARHWLRTKSAGSSPVKEFFGTRLIATHQNYNVLDIMDGLGY. 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00415 605 Coils Coil 248 268 - -
Seca4g00415 605 MobiDBLite consensus disorder prediction 34 81 - -
Seca4g00415 605 PANTHER OS01G0873900 PROTEIN 1 601 IPR045021 GO:0045927
Seca4g00415 605 Pfam Protein of unknown function (DUF668) 342 427 IPR007700 GO:0045927
Seca4g00415 605 MobiDBLite consensus disorder prediction 60 79 - -
Seca4g00415 605 Pfam Domain of unknown function (DUF3475) 124 179 IPR021864 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00415 Seca-Chr4 6826937 6833023 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00415 - - gmx:100780634 983.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00415 4 6826937 6833023 Seca4g00415 4 6826937 6833023 ECH