Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00369 ATGGCGAAAGGAAAGTATACGCATACACGAGCACAAGGGAGGAAATGGTCGACGGTTACGCTGGTTCTGTGGACGCTTTTCATGCTCACAGTAGTCATTTTCGTGCTCCTTGCACTCGGAATTGTTTATCTTCCGACTACCAACGACGATTCTTCAACCACAGATCTCAGTGCCTTCCGGCGCAAGACCTCTGAAAGTGGTGACAGCTTGGTGCAAAAGCAGGAGCAGTGGACCGAAGTTCTCTCCTGGGAGCCAAGAGCTTTCATTTATCACAATTTCCTGTCAAAAGAAGAATGTGAATACTTGATCAATCTGGCTGAACCTCATATGGTGAAATCAAGTGTTGTTGATAGCAAGACTGGAAAGAGTATGGATAGCAGGGTTCGAACTAGTTCGGGAATGTTTCTGAAGAGAGGAAGGGATAAAATTATCCAGAATATAGAAAGAAGAATTTCTGACTTTACCTTCATACCAGTAGAGAATGGAGAAGGACTTCAGGTTCTTCACTATGAAGTTGGGCAGAAATATGAGCCTCACTATGATTACTTCCTTGATCAGTTCAACACCAAGAATGGAGGCCAACGTATTGCTACAGTTCTTATGTACCTTTCAGATGTTGAAGAAGGTGGTGAGACCGTATTTCCTGCTGCCAAGGCAAACTTTAGTTCTGTGCCATGGTGGAATGATTTATCTGAATGTGCAAAAAAGGGTCTATCAGTGAAACCAAAAATGGGCGATGCTCTGCTGTTTTGGAGCATGAGACCAGATGCGACACTAGATCCATCTAGTTTACATGGTGGTTGCCCAATAATAAGAGGAAATAAGTGGTCTTCAACAAAGTGGTTGCATCTTGAGGAATACAAAGTTTAA 870 0.431 MAKGKYTHTRAQGRKWSTVTLVLWTLFMLTVVIFVLLALGIVYLPTTNDDSSTTDLSAFRRKTSESGDSLVQKQEQWTEVLSWEPRAFIYHNFLSKEECEYLINLAEPHMVKSSVVDSKTGKSMDSRVRTSSGMFLKRGRDKIIQNIERRISDFTFIPVENGEGLQVLHYEVGQKYEPHYDYFLDQFNTKNGGQRIATVLMYLSDVEEGGETVFPAAKANFSSVPWWNDLSECAKKGLSVKPKMGDALLFWSMRPDATLDPSSLHGGCPIIRGNKWSSTKWLHLEEYKV. 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00369 289 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 161 284 IPR005123 -
Seca4g00369 289 SMART p4hc 85 283 IPR006620 GO:0005506|GO:0016705|GO:0031418
Seca4g00369 289 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 58 284 IPR045054 -
Seca4g00369 289 FunFam Prolyl 4-hydroxylase 4 77 284 - -
Seca4g00369 289 Pfam 2OG-Fe(II) oxygenase superfamily 165 283 IPR044862 -
Seca4g00369 289 Gene3D q2cbj1_9rhob like domain 78 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00369 Seca-Chr4 5981277 5990114 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00369 K00472 - gmx:100818586 536.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00369 4 5981277 5990114 Seca4g00369 4 5981277 5990114 ECH