Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00360 ATGGAGAAATTGTATGGATTGAGCCATCTGTTCGTGACAGTCTTTCTGCATAACTTTTCGTTGTTCATGGTAGTACCAGCTATCACAGATGTCACAATGGCTGCGCTTTGTCCAGGACAAGATGAATGCTCCCTTGCCATCTACCTCACTGGTTTTCAACAAGCGGTGATAGGAGCGGGAACACTTGTGATGATGCCCCTCTTAGGTAATCTCTCAGATAAGTATGGGAGGAAGGCTATTATGACAATCCCTATGTGCCTCGCAATTATTCCCATAGGTGTATTAGCTTATAGCAGGGCAACAAAATTCTTCTATGTGTACTACGTGTCTAAGACACTTATTTCCATGATTTTTGATGGATGCGTCCCTTGCCTTGCACTAGCTTACGTGGCAGATAATGTACCAGAAAGTGGACGAAGCACTGCGTTTGGAATTCTTTCGGGTATAGGGTCCGCTGCGTTCGTGTTCGGCACCCTATCAGCTCGATTCTTATCTACTGCTCTAACTTTTCAGGTTTCCACTCTTGCTGCGATGATCGGAGCCGTGTACATGATAATTTTTCTTCGGGATTCACTCATCGATGACAACTACCTTTATGCCCCAATCATTTCAGAGGGAAAGCCTATGATTGCTAAAATTGATGGAAAATCGAAAAGCAACATTCAGTTACTTAAAGCTTTGCGTTCCCTAAAAGACCTAACCTCCTTCCTCAACAGTAGCTTAACTATTACCCAAGCAGCAATTATTGCATTCTTCAGCAACCTTGCAGATGTTGGCCTTCATGGTTCAATGATGTATTACTTAAAGGCTCGATTTCATTTTGACAAGAATCAGTTTGCGGACTTGATGGTCATTTCTGGGGTTGCAGGAACTGTGTCACAGCTTCTTCTTATGCCCATGTTGGCTCCTACTTTGGGTGAGGCAAGGCTGCTTTCAATTGGACTATTCTTTAATTGTGTACATATGTTCGTTTACAGCATAGCATGGTCCTCCTTGGTTCCTTATGCTGCCGCAATGTTCTCAATATTGTTTGTTTTTGCACAACCCTGTATACGGAGTATTGTGTCTAAGCAAGTTGGTCCCCATGAGCAGGGAAAGGCTCAAGGTTGCATCTCAGGCATATGTTCAATTGCGCATATTGTTTCTCCCTTGGCTTTCTCTCCATTAACAGCTCTCTTTCTATCTGAAAAGGCACCTTTTGATTTTCCTGGCTTCAGTATAATGTGTATTGGATTTGCTTCGATGGTATCTTTTGTTCAGAGTTTGATGCTTAAAGTGGTTCCTCCCATTTTGAGTTAG 1299 0.428 MEKLYGLSHLFVTVFLHNFSLFMVVPAITDVTMAALCPGQDECSLAIYLTGFQQAVIGAGTLVMMPLLGNLSDKYGRKAIMTIPMCLAIIPIGVLAYSRATKFFYVYYVSKTLISMIFDGCVPCLALAYVADNVPESGRSTAFGILSGIGSAAFVFGTLSARFLSTALTFQVSTLAAMIGAVYMIIFLRDSLIDDNYLYAPIISEGKPMIAKIDGKSKSNIQLLKALRSLKDLTSFLNSSLTITQAAIIAFFSNLADVGLHGSMMYYLKARFHFDKNQFADLMVISGVAGTVSQLLLMPMLAPTLGEARLLSIGLFFNCVHMFVYSIAWSSLVPYAAAMFSILFVFAQPCIRSIVSKQVGPHEQGKAQGCISGICSIAHIVSPLAFSPLTALFLSEKAPFDFPGFSIMCIGFASMVSFVQSLMLKVVPPILS. 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00360 432 SUPERFAMILY MFS general substrate transporter 10 416 IPR036259 -
Seca4g00360 432 Gene3D MFS general substrate transporter like domains 7 419 IPR036259 -
Seca4g00360 432 ProSiteProfiles Major facilitator superfamily (MFS) profile. 6 432 IPR020846 GO:0022857
Seca4g00360 432 Pfam Major Facilitator Superfamily 10 383 IPR011701 GO:0022857|GO:0055085
Seca4g00360 432 CDD MFS_SLC46_TetA_like 10 423 - -
Seca4g00360 432 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 7 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00360 Seca-Chr4 5876840 5885396 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g00360 6 428 Organic Solute Cotransporters AT2G16990 47.005 4.50e-125 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00360 - - gmx:100799551 728.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00360 4 5876840 5885396 Seca4g00360 4 5876840 5885396 ECH