Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00341 ATGATAATGGAGGAAGTGGTGGAAATGAAGAAAGCGAGAGAGACACAGTGCTCTCCGTCAGTCTCAATTAATCATCAGCAGCAGCAGCAAACACATTCTCCTAATTCTTCAATGGGCTTAACTCCTAAAAGCCCTTTTGTGTCTCGTTTTATGAGCACTCCCTTAGCAAGCCCAATGAAAAAGGCCATTGAAAACATGCAAGGCTACCTTGAAGAAGTTGGCCGTTTCACAAAGCTTGACCCACATGACGATTGGCTTCCAATCACAGAGTCAAGGAAAGGAAACGCGTATTATGCTGCGTTTCATGTGCTTAGTTCAGGGATTGGATTTCAAGCCCTTGTTCTTCCCCTCGCCTTCACCACTCTTGGCTGGACTTGGGGAATCTTGTGTCTCTGTGTGGCTTTCACATGGCAGCTATACACCTTATGGTTACTGGTTCAGCTTCACGAATCCGACTCAGGGGTGCGCCATAGCAGGTACCTCAAACTTGCTATGGCAGCATTTGGAGAAAAGCTAGGAAAACTACTGGTACTCTTTCCCGTCCAGTATTTATCTGGTGGGACGTGTGTGACACTTATCATGATTGGTGGTGGCACAATGAAGATTTTCTTTCAGACTGTATGTGGAGAGACATGCAAACTATACCCTCTTACAACCATAGAGTGGTATGTGGTGTTCACTGGGGCAGCTATTTTGCTTGCTCAGCTTCCAAACCTGAATTCAATCGCAGGGGTTTCCCTTATAGGAGCCATCACAGCCGTAGGTTATTGTGCTCTCATATGTATTGTGTCTGTAGTCCAAGGAAGACTTGCTCACGTGTCCTATGAGCCACCAAGGGGACAATCTGAGCTCACCAGAACTTTTAGTGTGTGGAGTGCACTCGGCATCATTGCCTTTGCTTTTAGAGGTCACAATCTTGTGTTGGAAATACAGGGAACCATGCGTTCAGATGCTAAGCAACCCTCTCGCCTGGCCATGTGGAAAGGTGTTATGTTTGCTTATCTAGTCATTGCCTTTTGTTTGTTTCCCCTGGCAATTGGAGGTTATTGGGTCTATGGAAATTTAGTAAGTGTTAAATACGTACACGTAATAGCTTATGTTTCCAATTTAGTAAGTGCTTAA 1122 0.451 MIMEEVVEMKKARETQCSPSVSINHQQQQQTHSPNSSMGLTPKSPFVSRFMSTPLASPMKKAIENMQGYLEEVGRFTKLDPHDDWLPITESRKGNAYYAAFHVLSSGIGFQALVLPLAFTTLGWTWGILCLCVAFTWQLYTLWLLVQLHESDSGVRHSRYLKLAMAAFGEKLGKLLVLFPVQYLSGGTCVTLIMIGGGTMKIFFQTVCGETCKLYPLTTIEWYVVFTGAAILLAQLPNLNSIAGVSLIGAITAVGYCALICIVSVVQGRLAHVSYEPPRGQSELTRTFSVWSALGIIAFAFRGHNLVLEIQGTMRSDAKQPSRLAMWKGVMFAYLVIAFCLFPLAIGGYWVYGNLVSVKYVHVIAYVSNLVSA. 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00341 373 PANTHER OS05G0424000 PROTEIN-RELATED 96 357 - -
Seca4g00341 373 MobiDBLite consensus disorder prediction 15 39 - -
Seca4g00341 373 MobiDBLite consensus disorder prediction 13 39 - -
Seca4g00341 373 Pfam Transmembrane amino acid transporter protein 93 357 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00341 Seca-Chr4 5515137 5519289 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g00341 5 356 Organic Solute Cotransporters AT1G47670 56.250 1.24e-140 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00341 K26385 - gmx:100788860 557.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00341 4 5515137 5519289 Seca4g00341 4 5515137 5519289 ECH