Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00338 ATGGGCTGCAACGCCTCTAGACTCGACCGGCTTCCGGCGGTGGCATTATGCCGTGACCGTTGCAAATTCGTGGACGAAGCACTCCGTCAAAGCTACGCTCTCGCTGACGCACACGTGGCACATATGGAGTCCCTCAGAACACTTGCCTCAGCTCTCCTTTGTTTCTTCAATCAATTTGAAGATTCTGAAGGCGAAAGCAAACCCTCGCTCTCGAAACCACCACCACCACCTCGCTCTCCATCTTCCTCCAGTTCTGACTCAGATGCACACGTCGTTTTGCATTCCGATTCAGAAGCCGAGGAGGATAGTACCGAAACGGAATCCCAACCGTTCACTCAAAGCCGTTATGATTATTATCTCAATCGCGACACTGTTTCCTCTGCAGTTTCTGATAATGTGACTTTCATGAATTACGTGCAGCCACTTTACGCTCCTTTTTCTCCGCCTCTGGCGAATACCGGTGGCTTTTACGGCTCAAAGCCACCGTCTCCGCCTCCTCCGAGAAGCTCAGCCTGGGATTTCTTGAACTTCTTCGAGCCGTACGAGAAATACCAAGTGCCGTACAGTCACAGTGTGAGTTGTGACACTGAATCGACGGAGGAGAAGGGAAAGGGAAAGGAGTTCATCGCTGCTCACGAGATTCAGAAAAGTGACGGTGCTGGAGGAGATGGTAAGGTGAAGGAGGCAGAAAATGGAGAAGCGAAGAATAAGAAGGATGATTTGAAGGAGAAGGATTTGGTTTCAGAGAAAAAGCCACTGGAGTCAGAGGAGTGCTGCAGCAACTCTGCGAAAGTTAAATCAGCGAAAGGTATCTCTGAGGCAGTGAAAGAGATTCAGATTCTATTTGAGAGAGCATCGGATTCGGGGAATCCAATTTTGGAAATGCTAGACGTTGGGAAACTCCGTTACCATCGAAAAATGGACTTCAATCCAATTTCATGCAAGATGATGCATGTGTTTACTCCCTCAAATCCCCTTACGGTTAAGTGCATGGAATCCTCGTTGGTTGGACGGAGAACGGGATCTGGGTATCAAGGAGTTTATAAAGACAAGGGCCTCAACTACGCGAATCTCTGCTCTACTTTGAAGAAACTATGTATGTGGGAGAAGAAGCTCTATCATGAAGTCAAGGCTGAGGAGAAATTGCGCATACTTCATCAGAAGAAGTGTAAGCAGTTGAGACGTATGAAGAAAAAGGATGCCGATGCACACAAAGTTGATTCTGTTCAAACTTTCATTGGGATTTTAGCTACAAAAATGAAAATTTCTATCCAAGTAGTGGACAAGATATCTAATACGATTAGCAAGTTAAGGGAAGAGGAGTTATGGCCACAGATCAACAGGTTTATTCTGATGTTTTTCGGAATGTGGAAAGATATGCAAGAATGTTACAGATGCCAGTATCAGGAAATTACTGATACCAAAGTTTTAGATGCCTCTTTGTTCAACAGAAAGTTTGGCAATGTTCATATCGATGCAGCAATAAAACTCAAATATGAGGTACAGAAATGGAATTTAAGCTTCTCAGATTGGATACATGCCCAGAAGTCCCATGTGAAAGCCTTGAATGGCTGGCTAGTAAGATGTCTATTGTATGAACCTGAAGAATTACCTGATGATTCAACTCCTTTCTCTCCTGGCAAGATTGGGGCACCACCTGTGTTTGTCATCGGTAACAAATGGTCACGGGCAGTGGATAATCTCTCAGAGAAGAATGTAATCGAAGCCGTAAATGGATTTATTCTCAGAGTCAATGAGCTATTGGAAAAGCATATTTTAGACCTTCAGCAAAAATTAACATTGGACAAGGAACTAGAGAGGAAAGTGAAAATCTTGGAAAGGGAGGAGCAAAAGATGCACAAAGTGGTGCAAGCTCGAGAGAGAAAGATGGTTTCAATTGACAGAGAAGAGACCGACGCTCTGTTAAGAGGGAATGGAGTACATCCTGGTGATGTCGTTGATACTATTAGCCTACAATCATGTCTCAAACAGATCTTTATTGCCATGGAAAGGTTCACTGCCACTACTGCTCGCTTATATGAAGAACTTTGCCAACAAATTAAGCAAGAAGACCATGTTTTGGGAGAATCCAACAAAAATCACTAG 2106 0.4421 MGCNASRLDRLPAVALCRDRCKFVDEALRQSYALADAHVAHMESLRTLASALLCFFNQFEDSEGESKPSLSKPPPPPRSPSSSSSDSDAHVVLHSDSEAEEDSTETESQPFTQSRYDYYLNRDTVSSAVSDNVTFMNYVQPLYAPFSPPLANTGGFYGSKPPSPPPPRSSAWDFLNFFEPYEKYQVPYSHSVSCDTESTEEKGKGKEFIAAHEIQKSDGAGGDGKVKEAENGEAKNKKDDLKEKDLVSEKKPLESEECCSNSAKVKSAKGISEAVKEIQILFERASDSGNPILEMLDVGKLRYHRKMDFNPISCKMMHVFTPSNPLTVKCMESSLVGRRTGSGYQGVYKDKGLNYANLCSTLKKLCMWEKKLYHEVKAEEKLRILHQKKCKQLRRMKKKDADAHKVDSVQTFIGILATKMKISIQVVDKISNTISKLREEELWPQINRFILMFFGMWKDMQECYRCQYQEITDTKVLDASLFNRKFGNVHIDAAIKLKYEVQKWNLSFSDWIHAQKSHVKALNGWLVRCLLYEPEELPDDSTPFSPGKIGAPPVFVIGNKWSRAVDNLSEKNVIEAVNGFILRVNELLEKHILDLQQKLTLDKELERKVKILEREEQKMHKVVQARERKMVSIDREETDALLRGNGVHPGDVVDTISLQSCLKQIFIAMERFTATTARLYEELCQQIKQEDHVLGESNKNH. 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00338 701 MobiDBLite consensus disorder prediction 64 114 - -
Seca4g00338 701 MobiDBLite consensus disorder prediction 212 244 - -
Seca4g00338 701 Pfam Protein of unknown function (DUF630) 1 57 IPR006868 -
Seca4g00338 701 Coils Coil 224 244 - -
Seca4g00338 701 PANTHER UNCHARACTERIZED 1 688 - -
Seca4g00338 701 Pfam Protein of unknown function (DUF632) 272 585 IPR006867 -
Seca4g00338 701 Coils Coil 595 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00338 Seca-Chr4 5459339 5463169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g00338 274 591 Acyl Lipid Metabolism Gene Families AT2G27090 26.257 1.40e-29 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00338 - - gmx:100815394 907.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00338 4 5459339 5463169 Seca4g00338 4 5459339 5463169 ECH