Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00237 ATGAGACCTGGAGTTGCTTCTTGGAGCTTTATCCTTCTAATCTTTTTGATTGCACAATACAGTGGCGCTAGAAAGATAGTAACAACATCTGGGAGAGATACTCAAGTGAAGGAACTATCCTATGATCTGCAGCAGCTCGCAACAGAGGGTCTTATCCTTACTAAGATTATGCAGGTTGATGTAGAAATGAATAAAAAAGAAGATGATGATGATGATGACGATGACGAGGATGATGACCATGAGGACAAGGATCACAAAAAACTCAAAGGGAAATATGTAAAAGAAGATGATGATGATGATCACCATAATGATCACAAAAAACTCAAGAGAAAGTATGTGAAAGATGATGATGAGAAAAAGATAAGGAAAAATAAAGGAAAGCGCGTTGATAAAGAAGATGAAGATGAAGAGGATAAAAATGAACATAAAAAGATGACCGGAAAGGATGTGCATGCTCATAAGCCGTCCCATATGGATCACAATCACATGGACCCTGAACTATATGTGTTTTTCATCCCAAGTGATTTAAAGGTTGGGAAAAAAATGCCCATTTATTTTTCCTGGAAAGATTCTTCAACATCTCCAAAATTTCTGCCTAGAGAAGAAGCTGACCAGATTCCTTTCTCATCAAAACAACTACCCTCTCTCCTCAATTTCTTCTCTATCTCAAAACACTCTCCTCAAGCCAAGGCCATGAAATATACACTTGAACAATGTGAATTTGAGCCTATGGAAGGAGAGACCAAGTTCTGTGCTACTTCCTTGGAGTCTTTGCTTGATTTTGCTCGTTATATGTTTGGATCCAATTCTCAATTCAAAGTTTTGACCACTACCCATCTCCCAAACTCCACCGTCCCTTCATTACAGAACTATACAATCTCAGAAGTGAAAAAGATTTCAGTTCCAAACATAATAGGATGTCACCCATTGCCTTACCCTATAGCAGTTTATTATTGCCACAGCCAAGAGGGTGACACTAATTTGTATGAGGTGTTGGTAGAAGGTGAGAATGGAGGGCGAGTTCAAGCTGCAGCTATTTGCCACATGGATACCTCTAAATGGGACCCAGATCATGTGGCTTTCCGTGTCCTCAAGGTTGAGCCGGGAACCTCACCTGTGTGTCATTTCTTCCCTTCTGATAATCTAGTCTGGGTGCCTTTGCCTGTGGCTGCATAA 1176 0.4022 MRPGVASWSFILLIFLIAQYSGARKIVTTSGRDTQVKELSYDLQQLATEGLILTKIMQVDVEMNKKEDDDDDDDDEDDDHEDKDHKKLKGKYVKEDDDDDHHNDHKKLKRKYVKDDDEKKIRKNKGKRVDKEDEDEEDKNEHKKMTGKDVHAHKPSHMDHNHMDPELYVFFIPSDLKVGKKMPIYFSWKDSSTSPKFLPREEADQIPFSSKQLPSLLNFFSISKHSPQAKAMKYTLEQCEFEPMEGETKFCATSLESLLDFARYMFGSNSQFKVLTTTHLPNSTVPSLQNYTISEVKKISVPNIIGCHPLPYPIAVYYCHSQEGDTNLYEVLVEGENGGRVQAAAICHMDTSKWDPDHVAFRVLKVEPGTSPVCHFFPSDNLVWVPLPVAA. 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00237 391 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 121 386 IPR044816 -
Seca4g00237 391 MobiDBLite consensus disorder prediction 65 79 - -
Seca4g00237 391 ProSiteProfiles BURP domain profile. 170 387 IPR004873 -
Seca4g00237 391 MobiDBLite consensus disorder prediction 80 156 - -
Seca4g00237 391 SMART BURP_2 168 387 IPR004873 -
Seca4g00237 391 MobiDBLite consensus disorder prediction 65 156 - -
Seca4g00237 391 Pfam BURP domain 169 386 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00237 Seca-Chr4 3768049 3769645 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00237 - - gmx:100806829 500.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00237 4 3768049 3769645 Seca4g00237 4 3768049 3769645 ECH