Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00201 ATGAAATTTTCAAATCACTATATCGGTTTCATTGACTTTGCAAGCATGGTTCTTTGGTGTCTTGAGGAATATGAAAAGATCAGGGAAAATGATGATGAAAACTCTCTCAAGGATATAGAGAACGATGGCTTTTTCTCCATCCTGGACCAGATTCCTCAGATTGGGCAAGCCAAGGTGAGTGAGTTGGCTAAGTCATTCCTATGGGAGCCATTTTTCCCTGTACGCATGGATGACACCATTTTGCAAGCACTGCTACTTCTTTCTAAGCATAGGCTTCATGTTTTGCCGGTCATGCAGCAACCTGATTCTGAACTCATTGGTTTTGTTACACAGAATGCCGTGGTCCAACTTCTCCTTCAATCAAGCGAACTAGAATGGTTTGATAATATTGCCAACAAGAACTTGTCAGATTTACGATTTGAAGACCAGGAACATCCTAGCTGTGTATATGGGAGCCAAACTGTTGCTGATGCTTTCAAGTTGCTCTGGCAGAACCAAACTTGTGCAGTTGCAGTTGTAGATCAACAAAGTAAGAAGATCCTGGGTAATGTGAGGAACAATGACATTTACAATCTTGTAAAGAAGGATTACCTCTTTAGAAATAGAATGATTATAACTGTAAAAGAATTCATTCATATAGAGAGTGACAAAAGAGACACTGAACCAACCATTGAACACGTGCCTTCTCTCACAGCAAGAAGTCTCCGCCTGGAAAACAGCTTCACACCCAGAATGGATTCACCAATTACCAACAAGGAAAATGAAACGCTCAAACAAACCATGGAGCATATGACAGAGACTAATAGCAGTTTCAGCTTTCTGATCAATGATGATGAACAAGTTACCGGTTTTCTCACACTGAGAGATATGATTCTGCAGTTTGCACCCCCATGTGTGGATTCCAGCATTAATGGAGGTGGGTTTTTTGAATTTGCTTTGGAGCAGAGTGGATGTCAAGTAAGAAATGGAACTATGATTCGTAACCATTGA 990 0.4061 MKFSNHYIGFIDFASMVLWCLEEYEKIRENDDENSLKDIENDGFFSILDQIPQIGQAKVSELAKSFLWEPFFPVRMDDTILQALLLLSKHRLHVLPVMQQPDSELIGFVTQNAVVQLLLQSSELEWFDNIANKNLSDLRFEDQEHPSCVYGSQTVADAFKLLWQNQTCAVAVVDQQSKKILGNVRNNDIYNLVKKDYLFRNRMIITVKEFIHIESDKRDTEPTIEHVPSLTARSLRLENSFTPRMDSPITNKENETLKQTMEHMTETNSSFSFLINDDEQVTGFLTLRDMILQFAPPCVDSSINGGGFFEFALEQSGCQVRNGTMIRNH. 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00201 329 ProSiteProfiles CBS domain profile. 241 301 IPR000644 -
Seca4g00201 329 SMART cbs_1 70 119 IPR000644 -
Seca4g00201 329 SMART cbs_1 247 295 IPR000644 -
Seca4g00201 329 SMART cbs_1 145 194 IPR000644 -
Seca4g00201 329 Pfam CBS domain 252 291 IPR000644 -
Seca4g00201 329 Pfam CBS domain 64 118 IPR000644 -
Seca4g00201 329 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 5 294 - -
Seca4g00201 329 ProSiteProfiles CBS domain profile. 67 124 IPR000644 -
Seca4g00201 329 SUPERFAMILY CBS-domain pair 5 119 IPR046342 -
Seca4g00201 329 SUPERFAMILY CBS-domain pair 144 294 IPR046342 -
Seca4g00201 329 Gene3D - 2 124 IPR046342 -
Seca4g00201 329 Gene3D - 128 295 IPR046342 -
Seca4g00201 329 CDD CBS_pair_SF 69 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00201 Seca-Chr4 3194821 3197712 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00201 - - gmx:100819351 502.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00201 4 3194821 3197712 Seca4g00201 4 3194821 3197712 ECH