Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00133 ATGAGCATTGCATCGACGACAGCGTACTTTGCTCGGCGCGCGGCGCAGAAGGAGAGGGTGCGGATCCTCTACCGCCGCGCCCTCAAAGATACTCTCAACTGGGCCGTCCATCGCCACCTCTTCTACGACGACGCTTCAAACCTCCGCGAAAGATTCGAGCAAAACAGACACGTGGAAGACCTTGATACCATTGATAGGCTTATAGCGGATGCTGAAGCATCCTACAATAAGTGGCGCCATCCTGATCCTTATATAGTTCCTTGGGCTCCTGGTGGTTCCAAGTTCACTCGCAACCCAACCCCACCTGAAGGGATTGAGATAGTATATGATTATGGCCGTGAAGATAATAACTGA 354 0.5198 MSIASTTAYFARRAAQKERVRILYRRALKDTLNWAVHRHLFYDDASNLRERFEQNRHVEDLDTIDRLIADAEASYNKWRHPDPYIVPWAPGGSKFTRNPTPPEGIEIVYDYGREDNN. 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00133 117 CDD Complex1_LYR_NDUFB9_LYRM3 16 92 IPR045292 -
Seca4g00133 117 Pfam Complex 1 protein (LYR family) 19 72 IPR008011 -
Seca4g00133 117 PANTHER NADH-UBIQUINONE OXIDOREDUCTASE B22 SUBUNIT 5 113 IPR033034 GO:0006120
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00133 Seca-Chr4 1982115 1986367 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00133 K03965 - gmx:100305723 230.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00133 4 1982115 1986367 Seca4g00133 4 1982115 1986367 ECH